Pairwise Alignments

Query, 136 a.a., outer membrane protein assembly factor BamE from Vibrio cholerae E7946 ATCC 55056

Subject, 171 a.a., Small protein A (tmRNA-binding) from Pseudomonas stutzeri RCH2

 Score = 80.1 bits (196), Expect = 1e-20
 Identities = 39/98 (39%), Positives = 61/98 (62%), Gaps = 2/98 (2%)

Query: 33  ALSGCSLLERLVYRIDINQGNYVDQQSVDQLKFGMSKDQVRFVLGSPMLVENGYPDTWYY 92
           AL+GCS     VY++DI QGN V Q  +DQL+ GM++ QVRF++G+P++ +  + + W Y
Sbjct: 18  ALAGCSFPG--VYKVDIQQGNVVTQDMIDQLRPGMTRQQVRFIMGNPLITDTFHANRWDY 75

Query: 93  IYHHTQGHNDPVQKNLIVKFNDGGKLVNVAGDFPAGDS 130
           +Y    G +   Q+ + + FN   +L  +AGDF  G S
Sbjct: 76  LYSIQPGGSQRQQERVSLVFNANDQLAGLAGDFMPGVS 113