Pairwise Alignments

Query, 161 a.a., SsrA-binding protein from Vibrio cholerae E7946 ATCC 55056

Subject, 160 a.a., tmRNA-binding protein SmpB from Pseudomonas fluorescens FW300-N2E2

 Score =  166 bits (421), Expect = 1e-46
 Identities = 83/158 (52%), Positives = 112/158 (70%), Gaps = 3/158 (1%)

Query: 1   MTKKKTNTKAGSNTIALNKKARHEYFIEDEFEAGMELQGWEVKSLRQGKANIAESYVYIK 60
           M K+K   K  + TIA NKKARH+YFIE  FEAGM L GWEVKSLR GKA + +SYV +K
Sbjct: 1   MAKQK---KHPTGTIAQNKKARHDYFIEQRFEAGMVLAGWEVKSLRAGKAQLVDSYVLLK 57

Query: 61  DGEAFISGMTIIPLQQASTHVVANPTRIRKLLLSRRELDNLFGRINREGMTLTALSLYWS 120
           DGEA++ G  I PL  ASTHV+A+P R RKLLL++REL+ LF  + ++G T    SLYWS
Sbjct: 58  DGEAWLLGSHITPLTTASTHVIADPVRSRKLLLNKRELEKLFASVQQKGYTCVCTSLYWS 117

Query: 121 RSWVKIKIGVAKGKKLHDKREDLKEKEWQRQKDRVMKS 158
           +  +K +I + KGKK +DKR+  +E++  R+  R +++
Sbjct: 118 KHLIKCEIALGKGKKEYDKRDTERERDAGRELQRAVRN 155