Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 418 a.a., Phage integrase from Pseudomonas fluorescens FW300-N2E2

 Score =  523 bits (1347), Expect = e-153
 Identities = 251/412 (60%), Positives = 314/412 (76%)

Query: 1   MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSF 60
           M  N  +L+D+++KA K   K++ L DGDGL+LR++ +GS  W FNY  P    R N++ 
Sbjct: 1   MPTNATRLSDRQLKAVKATGKDFVLSDGDGLQLRVRASGSMMWNFNYREPLTRSRINMAL 60

Query: 61  GMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQN 120
           G YPD+SL  ARK  + A+EL+A GIDP+  R   +       EHTFE V   WF +K++
Sbjct: 61  GPYPDLSLANARKKAVEARELLALGIDPKAQRDEVRHAKLAETEHTFEKVATAWFELKKD 120

Query: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNE 180
            VT  Y  DIWRSL LH+ P +   P+  ITAP +I++L+PIEAKGSLETVKRL+QRLNE
Sbjct: 121 SVTKAYGEDIWRSLTLHVLPSMKTTPLSQITAPMVIKILRPIEAKGSLETVKRLSQRLNE 180

Query: 181 VMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE 240
           +M +  N GLI ANPL GI+A FKKPKKENMAAL P ELPELM  IANASIKRTTRCL+E
Sbjct: 181 IMTYGVNSGLIFANPLNGIRAVFKKPKKENMAALPPEELPELMMEIANASIKRTTRCLIE 240

Query: 241 WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG 300
           WQLHTMTRPAEA+  RW +I++ +++WTIP ERMKKRR H IPLT+Q LALLE +K +SG
Sbjct: 241 WQLHTMTRPAEAATTRWADIDFNKRIWTIPPERMKKRRPHTIPLTDQALALLETLKQLSG 300

Query: 301 HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESA 360
           +R+++FPSDR P+   NSQTANMALKRMGF  RLVSHGLRS+AST LNE G+DP+L+E A
Sbjct: 301 NREYVFPSDRNPRTHANSQTANMALKRMGFQDRLVSHGLRSMASTILNEHGWDPELIEVA 360

Query: 361 LAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGTKQLKNK 412
           LAHVD ++VRSAYNRTDY+ERR+PMM WWSEHI++AA GSLS +   Q +++
Sbjct: 361 LAHVDKDEVRSAYNRTDYIERRRPMMAWWSEHIQKAAIGSLSASAINQTRDR 412