Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 433 a.a., Integrase from Dechlorosoma suillum PS

 Score =  239 bits (611), Expect = 9e-68
 Identities = 131/404 (32%), Positives = 217/404 (53%), Gaps = 7/404 (1%)

Query: 8   LTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSFGMYPDIS 67
           LTD +++ +KP EK Y L DG GL L ++P+G+K W + Y+  T  K    + G YP +S
Sbjct: 5   LTDTKVRNAKPAEKPYKLQDGQGLYLDVRPSGAKFWRYRYWI-TPEKDGIYTIGEYPVVS 63

Query: 68  LLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQNDVTPDYA 127
           L  AR+    A+E   QGI+P   ++ ++      H +TFE V ++W    +N  T  Y 
Sbjct: 64  LSDARREREWAREQAKQGINPTHAKEAERLRRMGEHANTFEAVAREWIDQNRNHWTEKYL 123

Query: 128 LDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNEVMNFATN 187
             + R L   +FP I   P++ +T+  ++ +++ +E +G+      + Q   ++  +A  
Sbjct: 124 YQVERFLGNDVFPKIGALPIRMVTSAHLLGIIRTVEERGAKSIAVLIRQWSGQIFRYAVA 183

Query: 188 CGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLEWQLHTMT 247
                ++P   ++ A KK    +   L+  E+P +++ +      R T    +  L+T  
Sbjct: 184 TLRADSDPSAPLRGAIKKDPVRHNPPLSKDEIPVMLNKLQKYGGYRGTVLATKLMLYTFV 243

Query: 248 RPAEASGARWDEINWEEKVWTIPAERMKKRRE------HRIPLTEQMLALLEVMKPISGH 301
           R  E   A W E + E   W +PA+RMK +++      H +PL+ Q L +L+ +K +SG 
Sbjct: 244 RTVELRKAEWTEFDLEGGEWRVPADRMKMKKQMKVGESHIVPLSRQALEVLKELKTLSGG 303

Query: 302 RDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESAL 361
           R F+FP+ R P     + T N AL+RMG+AG+   HG R+ AST L+E G++   +E  L
Sbjct: 304 RKFLFPNLRTPDTCMTATTINKALERMGYAGKFSGHGFRATASTMLHELGWNEKAIERQL 363

Query: 362 AHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTG 405
           AH + N+V++AYN  +YL  R+ MM  WS+ I+E AR +    G
Sbjct: 364 AHAERNKVKAAYNHAEYLPERREMMQAWSDWIDELARKAAEKEG 407