Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., integrase from Klebsiella michiganensis M5al

 Score =  439 bits (1130), Expect = e-128
 Identities = 213/410 (51%), Positives = 293/410 (71%)

Query: 1   MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSF 60
           MA+ T  L+ KEI+++KP+E +Y L+DGDGL L IK +GSK W F Y RP   KRA  S 
Sbjct: 1   MARQTKPLSVKEIESAKPKEADYVLYDGDGLELLIKTSGSKIWQFRYIRPVTKKRAKKSI 60

Query: 61  GMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQN 120
           G YP ++L  AR     ++ L+A+ IDPQ+ ++ Q +   E   +TF+ V + W+ +K+ 
Sbjct: 61  GPYPSVTLADARNYRAESRSLLAKQIDPQEHQQEQLRSSLEAKTNTFQLVAERWWNVKKA 120

Query: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNE 180
            VT DYA DIWRSLE  +FP I D  V  I A  +++ ++P++A+G+LETV+RL QR+NE
Sbjct: 121 SVTEDYAEDIWRSLERDVFPAIGDVSVTDIKAHTLVQAVQPVQARGALETVRRLCQRINE 180

Query: 181 VMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE 240
           VM +A N GLI A P   I  AF+KP+K+NM ++ P +LP+LM  +  ASI  +TRCL  
Sbjct: 181 VMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTMRTASISLSTRCLFM 240

Query: 241 WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG 300
           WQL T++RPAEA+ ARW+E++ E + W IPA RMK  R+H +PL+++ +A+LE+MKP+SG
Sbjct: 241 WQLLTISRPAEAAEARWEEVDMEAREWKIPASRMKMNRDHTVPLSDEAMAVLEMMKPVSG 300

Query: 301 HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESA 360
           +R+FIFPS   P +P NSQT N +LKR GF G LVSHGLRS+AST LNEQ F PD++E+A
Sbjct: 301 NREFIFPSRIKPNQPMNSQTVNASLKRAGFGGVLVSHGLRSIASTALNEQNFPPDVIEAA 360

Query: 361 LAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGTKQLK 410
           LAHVD N+VR AYNRTDYLE+R+PMM WW++ +  A RGS+   G K ++
Sbjct: 361 LAHVDKNEVRRAYNRTDYLEQRRPMMQWWADFVMAADRGSMIEGGMKGVR 410