Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 413 a.a., Prophage integrase IntA from Enterobacter sp. TBS_079

 Score =  444 bits (1142), Expect = e-129
 Identities = 219/410 (53%), Positives = 291/410 (70%)

Query: 1   MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSF 60
           MA+ T  LTD EIKA+KP++ +Y L+DGDGL L IK +GSK W F YYRP   +R   SF
Sbjct: 1   MARKTKPLTDTEIKAAKPKDADYQLYDGDGLTLLIKSSGSKLWQFRYYRPLTKQRTKQSF 60

Query: 61  GMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQN 120
           G YP +SL  ARK    ++ L+A+ IDPQ+ +K Q +  +E   +TF  V + W+ +K+ 
Sbjct: 61  GAYPAVSLSDARKLRAESRVLLAKDIDPQEHQKEQVRNSQEAKTNTFLLVAERWWNVKKT 120

Query: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNE 180
            VT DYA DIWRSLE  +FP I D  V  I A  +++ ++P++A+G+LETV+RL QR+NE
Sbjct: 121 SVTEDYADDIWRSLERDVFPAIGDISVTEIKAHTLVKAVQPVQARGALETVRRLCQRINE 180

Query: 181 VMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE 240
           VM +A N GLI A P   I  AF+KP+K+NM ++ P +LP+LM  I  ASI  +TRCL  
Sbjct: 181 VMIYAQNTGLIDAVPSVNIGKAFEKPQKKNMPSIRPDQLPQLMQTIRMASISLSTRCLFM 240

Query: 241 WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG 300
           WQL T+TRPAEA+ ARWDEI+++   W IPA RMK  R+H +PL +  +A+LE+MK +SG
Sbjct: 241 WQLLTITRPAEAAEARWDEIDFDASEWKIPAARMKMNRDHTVPLPDGAIAILEMMKSLSG 300

Query: 301 HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESA 360
            R+FIFPS   P +P NSQT N ALKR G  G LVSHGLRS+AST LNEQGF PD++E+A
Sbjct: 301 GREFIFPSRIKPTQPMNSQTVNAALKRAGLGGVLVSHGLRSIASTALNEQGFPPDVIEAA 360

Query: 361 LAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSLSVTGTKQLK 410
           LAH+D N+VR AYNR+DYLE+R+PMM WW++ + +A  GS+  +G   LK
Sbjct: 361 LAHIDKNEVRRAYNRSDYLEQRRPMMQWWTDFVSKADSGSIVESGKTGLK 410