Pairwise Alignments

Query, 422 a.a., integrase from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., phage integrase family protein (RefSeq) from Shewanella sp. ANA-3

 Score =  519 bits (1337), Expect = e-152
 Identities = 247/401 (61%), Positives = 310/401 (77%)

Query: 1   MAKNTVKLTDKEIKASKPREKEYNLFDGDGLRLRIKPNGSKQWIFNYYRPTNGKRANLSF 60
           M +    L D E++ +KPREKEYNL DG+GL LR++P GSK W+ NY RPT+ KRANL+ 
Sbjct: 1   MPRMAKPLNDTEVRQAKPREKEYNLSDGNGLMLRVRPIGSKTWLLNYSRPTSRKRANLTL 60

Query: 61  GMYPDISLLQARKSLLSAKELIAQGIDPQDDRKRQQQVHKEIHEHTFENVTKDWFAIKQN 120
           G YP+++L  AR+  L A++LIAQ IDPQ+ R+ Q+Q    IHEHTFENV   WF IK+ 
Sbjct: 61  GTYPELTLADARRKALDARKLIAQDIDPQEHREGQRQALAAIHEHTFENVATQWFDIKKT 120

Query: 121 DVTPDYALDIWRSLELHIFPHISDKPVKAITAPEIIELLKPIEAKGSLETVKRLTQRLNE 180
           ++T ++A   WRS +LH+ P+I   P+  ITAP +IE+ +PIEAKGSLETVKRLTQRLNE
Sbjct: 121 EITENHAASTWRSFKLHVLPYIGSTPISQITAPMVIEIFRPIEAKGSLETVKRLTQRLNE 180

Query: 181 VMNFATNCGLIQANPLTGIKAAFKKPKKENMAALTPAELPELMSAIANASIKRTTRCLLE 240
           VM +A N GLI ANPL+GIKAAFKKPKK+ MAA+ P ELPEL+S ++ ASIKR TR L+E
Sbjct: 181 VMTYAVNTGLIHANPLSGIKAAFKKPKKQKMAAMAPYELPELLSTLSRASIKRVTRLLIE 240

Query: 241 WQLHTMTRPAEASGARWDEINWEEKVWTIPAERMKKRREHRIPLTEQMLALLEVMKPISG 300
           WQLHTMTRP EA+GARWDE N+++++WTIPAERMK +REH IPL++  + +L+ +K ISG
Sbjct: 241 WQLHTMTRPNEAAGARWDEFNFDDRLWTIPAERMKMKREHVIPLSDACMLILQELKSISG 300

Query: 301 HRDFIFPSDRAPKKPCNSQTANMALKRMGFAGRLVSHGLRSLASTTLNEQGFDPDLVESA 360
           HR+++FP+DR PK   N QTAN ALKRMG   R  +HGLR+LASTTLNEQGFD D+VE+A
Sbjct: 301 HREYLFPADRNPKTHSNVQTANAALKRMGLQDRTTAHGLRALASTTLNEQGFDWDVVEAA 360

Query: 361 LAHVDDNQVRSAYNRTDYLERRKPMMCWWSEHIEEAARGSL 401
           LAH D NQVRSAYNR  YLERR+ MM WWS+ I+ A    L
Sbjct: 361 LAHTDKNQVRSAYNRATYLERRREMMEWWSKSIKSAEANML 401