Pairwise Alignments

Query, 256 a.a., accessory colonization factor AcfC from Vibrio cholerae E7946 ATCC 55056

Subject, 260 a.a., molybdate ABC transporter substrate-binding protein from Methanococcus maripaludis S2

 Score = 51.2 bits (121), Expect = 2e-11
 Identities = 57/235 (24%), Positives = 106/235 (45%), Gaps = 17/235 (7%)

Query: 26  VNLYGPGGPHVPLIKVAESFEKSQSKRVNITF-GPQATWNDKAKKNADILFGASEHSALA 84
           ++ Y   G  +P+ ++A  FEK    +V   + G  A  +     N   +F   + S + 
Sbjct: 33  LHAYVGAGMQMPMDEIAVEFEKKYGIKVEYDYSGSGALLSKIVASNQGDIFMPGDCSYVY 92

Query: 85  IAEGHSERFSKFNIHPVFMREAIILVKKGNPKNIKGMADLLKPGIGIVVNDGAGVSNTSG 144
             E         N   V     +I V+KGNPKNI G++DL + G+ + + D +       
Sbjct: 93  QLEDKEMIKECSN---VTKHIPVIAVQKGNPKNITGLSDLGQNGLELALGDDSISLGKLF 149

Query: 145 TAVWEDSVGRMKNVEKLQAFRSNIHVFAPNSGSARK---AFVDGEDIDAWITWVDWAIAN 201
             +   +  +  N+ K  A  +N  V    +G+  K    +V  +++DA + W   A  N
Sbjct: 150 KKILAKAETKGLNITK--AVDTNTVV----TGATVKQVLLYVTEKNVDAAVVWKADAYEN 203

Query: 202 PTIGDMVRMEDEYRIYRDFNV-VLAKNPSSEAID-FFDYLTKSKDAEAIFQHYGW 254
           P   D+V +E EY I +   + +L+   + E    F+D++  + + + IF+ +G+
Sbjct: 204 PDRVDIVPIESEYNIVKTVPISILSTTENYENSKLFYDFV--NNEGKEIFEKHGF 256