Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 626 a.a., Chemotactic transducer from Pseudomonas fluorescens FW300-N2E2

 Score =  251 bits (640), Expect = 9e-71
 Identities = 189/635 (29%), Positives = 329/635 (51%), Gaps = 37/635 (5%)

Query: 1   MKFSIKLLMIFTSIIITISSILTYFQMHGTNEYLDRTIKDTISETLDS-LEDKINLSIES 59
           +KFS K+L+  + +++   ++ T +     N+YL R   +TI  +L+S +E   +L+  S
Sbjct: 3   LKFSHKILLAASGVVVLAFALFTLY-----NDYLQR---NTIGSSLESSIEQSGDLTASS 54

Query: 60  KVDVSKSVIDIYENLLEGESPLSKFKD----VDVNHLSNVFQLFGYADERTGEIITNDPN 115
             +     I + ENL +  +      D    VD   L++ FQ F Y  +  G + T  P+
Sbjct: 55  IQNWMSGRILVLENLAQNIAHQGTAADLPGLVDQPALTSNFQ-FTYVGQANG-VFTQRPD 112

Query: 116 FKVPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDI 175
            K+P G+DPR R WY  A   +   L+ PY+  +   L+VT + P+ +  +L GV+  D+
Sbjct: 113 AKMPDGYDPRQRPWYKQAVTADKTMLTPPYLAAVGG-LVVTVALPVKHNGELLGVVGGDL 171

Query: 176 PLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTKD 235
            L+ + ++I S +    G  F+V   G++I     D   KNL   +   P+ + +   +D
Sbjct: 172 SLETLVKIINSVDFGGIGHAFLVSGDGQVIVSPDKDQVMKNLKDIYPGTPVRIGKG-IQD 230

Query: 236 KNGVNYDVLIKMSDFGG-----WNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAIL 290
                 D ++  +   G     W +   ID  KA + +   R +++    +  +    +L
Sbjct: 231 VELNGQDRILSFTPVTGLPNAEWYIGLSIDKAKAYAPLSQFRTSALIAMFVAVAAIALLL 290

Query: 291 LFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSE 350
              ++++++PL  +  AM +I+ G  DLT R+      EF+ +  SFN FV  + + +SE
Sbjct: 291 SLLIQVLMRPLTTMGRAMQDIAQGEGDLTRRLVVQGKDEFAVLGGSFNQFVERIHASISE 350

Query: 351 VKMNSEKINCITTETQELVEVCNNSVA---DQYRELDMLASSMNEMVATSNQIAQITSEA 407
           V   + +++ ++   Q ++   N S+    +Q    + +A+++N++ A + +IA+  ++A
Sbjct: 351 VSSATRQVHDLS---QRVMTSSNASLVGSDEQSARTNSVAAAINQLGAATQEIARNAADA 407

Query: 408 SEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIA 467
           S+  S  + Q ++G   V    +++  L +K+  + + I+ LN  T NI  IL  I  I+
Sbjct: 408 SQHASGASEQADDGRQVVEKTIQAMTELSQKISLSCTQIETLNASTDNIGHILDVIKGIS 467

Query: 468 DQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSV 527
            QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQES + I  +I  LQ  S  +V
Sbjct: 468 QQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQESAEEIHKMITSLQVGSREAV 527

Query: 528 HVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINS--- 584
             M+ S   + E++ ++  +   L +++Q + +I  +   VA A  EQ+ V E +N    
Sbjct: 528 TTMNASQTSSEESVEVANQAGLRLVSVTQRIGEIDGMNQSVAAATEEQTAVVETLNMDVS 587

Query: 585 -----NSISIKDKADTLSSLGNKISQQAYSQKALI 614
                N  S+ +  +TL    + +SQQA   K L+
Sbjct: 588 HINLLNQQSVANLNETLKDC-DALSQQANRLKQLV 621