Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 712 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  218 bits (556), Expect = 5e-61
 Identities = 158/512 (30%), Positives = 270/512 (52%), Gaps = 37/512 (7%)

Query: 144 PYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPLDDVQELI-----KSYNPFDAGTIFIV 198
           PY    T  ++ +   PI       G++  D+ ++ +Q+++     K Y+   AG + ++
Sbjct: 205 PYRVGSTMTMLASFIEPIMIDGQFQGIVGADLSVNFIQDMLVAADGKLYD--GAGEMALL 262

Query: 199 DNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTKDKNG---VNYDV------LIKMSD 249
            ++ +++   K+     +  G+  S  L  S      K G   V YD+      +     
Sbjct: 263 SSNNRLVAFTKDP----SKLGEKASDLLDASALDNLAKLGDGEVRYDIDEAHGHIEVYMP 318

Query: 250 FG------GWNLVSIIDHDKARSDIITL-------RNNSIFTAVILASVFFAILLFTMRL 296
           FG       W L+  +  +   +D+  L       R   IF   I+  V   I L  + L
Sbjct: 319 FGIGETNARWTLMLQLPLNAVMADLQALQKDLDHQRQADIFGMAIVGLVIAGIGLLVIWL 378

Query: 297 M----LKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVK 352
           +     +PL Q+   + +I+ G  DLT R+ +    E   I   FN F+  LQ ++++V 
Sbjct: 379 VGHGIARPLKQMVAMLDDIAQGEGDLTRRLVSDRADELGAIARGFNTFLSKLQGMITQVV 438

Query: 353 MNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITS 412
            + + ++  +  T ++    N  V  Q  E+D +A++++EM AT+  +A+  ++A++  S
Sbjct: 439 TSVQSVSDSSEHTADIAIRTNQGVHKQMSEIDQVATAVHEMTATAQDVARNATQAAQAAS 498

Query: 413 KINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNL 472
             +   ++G+  V   + S+G L  ++ K   V+Q L + ++NI+ IL AI  IA+QTNL
Sbjct: 499 HADQAASQGMQIVRDTSTSIGALAVEIGKAVGVVQTLAKDSENINAILTAIRGIAEQTNL 558

Query: 473 LALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDE 532
           LALNAAIEAARAGE GRGFAVVADEVR+LA KTQ++T+ I ++I  LQ+ +   V VM++
Sbjct: 559 LALNAAIEAARAGEQGRGFAVVADEVRNLAQKTQQATEEIQTMIQQLQQGTRDVVRVMED 618

Query: 533 SFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDK 592
           S     E++  +A + Q L+ I+Q+V  I D+  Q+A+AA EQS V+++IN N I+I   
Sbjct: 619 SQTRTDESVQHAAKAAQALETITQAVSVINDMNTQIASAAEEQSAVADDINRNVINIGQV 678

Query: 593 ADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624
           A+ ++S  ++ S  +     L   Q  LI++F
Sbjct: 679 ANEVASGADESSAASAGLTKLAEQQRRLINQF 710