Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  180 bits (456), Expect = 2e-49
 Identities = 107/336 (31%), Positives = 185/336 (55%)

Query: 289 ILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIV 348
           +L+    ++L P+ +L   +  I+ G  DL  R+   +  E  ++ ++FN F+  LQ ++
Sbjct: 207 VLVVLPLVVLSPMRRLLHRVEQIAEGGGDLKGRLEVRSADELGQLGSAFNRFLDKLQPLI 266

Query: 349 SEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEAS 408
           +EV   + +++       ++    +  ++ ++  LD ++++  +M A  +++A   + AS
Sbjct: 267 AEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSAAVHEVAHNAANAS 326

Query: 409 EITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIAD 468
               + + Q  +G   VSS  ES+  L ++++     I+ L ++T +I  +L+ I  IA+
Sbjct: 327 GAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSSIGAVLEVIRGIAE 386

Query: 469 QTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVH 528
           QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQ+STK+I   I  LQ     +V 
Sbjct: 387 QTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVRIERLQSGVAKAVQ 446

Query: 529 VMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSIS 588
            M      A +++  +A   Q L     S+ QI D+  Q+A+A  EQS V+EEI  N   
Sbjct: 447 AMHVGSTKARDSVERAAGVDQVLSGTGGSIQQINDMAAQIASACEEQSSVTEEIARNISD 506

Query: 589 IKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624
           I+D ++  ++   +    +    +L  +  +L  +F
Sbjct: 507 IRDLSNEAAANSAQSMHASQQLSSLSRNLAELTGRF 542