Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 647 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  211 bits (536), Expect = 1e-58
 Identities = 153/572 (26%), Positives = 274/572 (47%), Gaps = 29/572 (5%)

Query: 62  DVSKSVIDIYENLLEGESPLSKFKDVDVNHLSNVFQLFGYADERTGEIITNDPNFKVPTG 121
           ++++ ++DI+E   +     +        +LS   +  GYA         +DP       
Sbjct: 94  EINQQLLDIFERFAKSHPTTA--------YLSVGMEDGGYASW------PDDPKM---AN 136

Query: 122 FDPRTRSWYLNAKKL-NTFSLSEPYVDLITEKLMVTTSAPIYNKNDLT-GVIFFDIPLDD 179
           +DPR R WY  A     T   ++ Y     +  ++ T   + + +    GV+  D+ L  
Sbjct: 137 YDPRVRPWYKAAMAAPGTNVRTDAYYWAPDDVSLIGTVHTVADASGKPIGVVGLDVSLKQ 196

Query: 180 VQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISGKNLFGDF-DSFPLSVSESKTKDK-- 236
           + EL+K+    ++G + +V+ +G ++    +    K+ F    D  P     +K+ D   
Sbjct: 197 LTELVKNIKLGESGYLMLVEANGNVLV---DPADAKHNFKPLADLGPNYAELAKSSDGVT 253

Query: 237 ----NGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLF 292
               +GV Y   +  S   GW  + +I  D+  ++  +L       A +LA VF  +   
Sbjct: 254 QIEIDGVPYMANVVSSKGLGWRFIGLIKRDEVMAEASSLTWLIAAIAAVLAVVFALVGAS 313

Query: 293 TMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVK 352
              ++++P+  + + +  I+ G  DLT ++      E + +   FN F+G +  ++  + 
Sbjct: 314 FASVIVRPIRGVANGLQEIAEGEGDLTRKLTVQGKDETATLAGWFNQFLGMIAQLMQRIG 373

Query: 353 MNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITS 412
             S  +     +T  + +  N++   Q + +++++++ NEMVAT+N++A+  S+A+    
Sbjct: 374 SASSDLQTAAADTSHVAQNMNDAAGRQRQAVELVSTAFNEMVATANEVARSCSQAASSAD 433

Query: 413 KINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNL 472
           +    V++G   +   T SV  L + L K+   +Q L + ++NI+ IL  I  IA+QTNL
Sbjct: 434 EGYRDVHDGQHHIGEATGSVMKLSDDLQKSTQTMQALEQDSKNINTILDTIRSIAEQTNL 493

Query: 473 LALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDE 532
           LALNAAIEAARAG+ GRGFAVVADEVR+LA +T +ST  I S++  L   +      M  
Sbjct: 494 LALNAAIEAARAGDQGRGFAVVADEVRALARRTADSTGEIDSLLGNLARRTQEVTQQMQS 553

Query: 533 SFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDK 592
           S  ++  ++     ++   D I  SV  I D   Q+ATAA EQ  V+E+IN +   I   
Sbjct: 554 SLQVSQTSVERIQQARDSFDKIRNSVDSIRDQNTQIATAAEEQHQVAEDINRHIAQIHAD 613

Query: 593 ADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624
           A  +    +     +     + G    L+ +F
Sbjct: 614 AQLVEEFAHSAQTGSGRLTDISGQLKGLVGRF 645