Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  206 bits (523), Expect = 3e-57
 Identities = 165/655 (25%), Positives = 301/655 (45%), Gaps = 38/655 (5%)

Query: 1   MKFSIKLLMIFTSIIITISSILTYFQMHGT-----NEYLD------RTIKDTISETLDSL 49
           MK   KL++ F  +     S++    +  T     ++++D      R I   I +  D+ 
Sbjct: 1   MKIKNKLVLTFVLVAFIPVSLVAVISVTNTRTLAVDQFMDGSTREIRQIDGNIRQFFDAS 60

Query: 50  EDKINLSIESKVDVSKSVIDIYENLLEGESPL--------SKFKDVDVNHLSNVFQLFGY 101
           +  ++      V VS   +  Y+       PL         +F      H S      G 
Sbjct: 61  QQNVDQMATDPVYVSVGALKNYQTGDAASRPLPPAAQQLIERFAHYGAAHPSAAILSIGL 120

Query: 102 ADERTGEIITNDPNFKVPTGFDPRTRSWYLNA-----KKLNTFSLSEPYVDLITEK--LM 154
            D    +   +DP       +DPR+R WY  A     K + T +    Y D   E   L+
Sbjct: 121 EDGSYAKW-PDDPQL---ANYDPRSRPWYKAAMASPGKTVRTPAFYPAY-DYGKEDAALV 175

Query: 155 VTTSAPIYNKNDLTGVIFFDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDISG 214
            T  A I +   + GV+  ++ L ++ EL+KS    ++G + ++++   I+  +  D + 
Sbjct: 176 GTARAMITSDGIVKGVLAVNVSLKNLTELVKSIKLGESGYVMLIEDG--IVLVDPRDTTH 233

Query: 215 -----KNLFGDFDSFPLSVSESKTKDKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDII 269
                K+L   +         S   + NG+ Y   +  S   GW  + +I+  +  S   
Sbjct: 234 SFKPLKDLGAAYAKLATIPQGSTEVELNGIPYMANVWTSPDLGWRYIGLIERSEVMSAAT 293

Query: 270 TLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQE 329
            +   +      L  +F  + +   + ++KP+ Q++  + +I+ G  DL   +    + E
Sbjct: 294 RMTYLTTLIVGGLTVIFALVAVAFSKSIVKPISQVSTGLQSIAQGEGDLRRELEFQGNDE 353

Query: 330 FSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASS 389
            +++   FN F+  ++ ++  +   S  +   +    E+    N +   Q   +++++++
Sbjct: 354 TAELAGWFNKFLSAIRQLIQHIGAASSNLQNASRVNSEVANNMNEAAGRQREAVELVSTA 413

Query: 390 MNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDL 449
            NEMVAT+N++A+  S A+E     + +V EG   +   T++V  L  +L ++   + +L
Sbjct: 414 FNEMVATANEVARSCSGAAESAENGHRRVAEGKQQIEITTDNVNRLGRRLTESSQSMTEL 473

Query: 450 NRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQEST 509
              +++I+ IL  I  IA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA +T +ST
Sbjct: 474 EAGSRSINQILGTIRAIAEQTNLLALNAAIEAARAGDQGRGFAVVADEVRALAKRTSDST 533

Query: 510 KNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVA 569
             I  ++  L   +   +  M     ++  +++    ++   + I  SV +I D   Q++
Sbjct: 534 GEIEQLLGALGSKTQEVMGKMGSCLELSHASVSSIESTRDSFEGIQLSVNEIRDQNLQIS 593

Query: 570 TAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624
            AA EQ  V+EEIN +   I D+A  + SL N     +    +L    + L+ +F
Sbjct: 594 AAAEEQHSVAEEINRHIQQIYDEARLVESLANSAQDDSGKLSSLSDELNGLVGRF 648