Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  254 bits (648), Expect = 1e-71
 Identities = 186/631 (29%), Positives = 329/631 (52%), Gaps = 28/631 (4%)

Query: 1   MKFSIKLLMIFTSIIITISSILTYFQMHGTNEYLDRT-IKDTISETLDSLEDKINLSIES 59
           +KFS K+L+  + I+I   S+ T F     N+YL R  I+D ++  LD + D    +I++
Sbjct: 5   LKFSHKILLAASLIVIATFSLFTLF-----NDYLQRNAIRDNLNSYLDEMGDVTAHNIQN 59

Query: 60  KVDVSKSVIDIYENLLEGESPLSKFKDV-DVNHLSNVFQLFGYADERTGEIITNDPNFKV 118
            +     +++     +  +   ++  ++ +   L++ F +F Y   + G  +   P  ++
Sbjct: 60  WLSGRILLVESAAQSIGSDDAEARVAELLEQKALASTF-MFSYLGGQDGSFLMR-PAEEM 117

Query: 119 PTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVIFFDIPLD 178
           P  +DPR R WY +A      +L+EPYVD  + +L+++ + P        GV+  D+ L 
Sbjct: 118 PADYDPRARPWYKDAIAAGGSTLTEPYVDAASGELVISIATPAQQNGRNIGVVGGDLGLK 177

Query: 179 DVQELIKSYNPFDAGTIFIVDNSGKIIF---GNKNDISGKNLF-GDFDSFPLSVSESKTK 234
            + E+I + +    G  F+V   GKI+    G+K   S   LF G   S   + SE++  
Sbjct: 178 VLVEIINALDFNGMGHAFLVSGDGKILVHPDGSKVMKSLGELFPGHTPSLDANYSEAELD 237

Query: 235 DKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAILLFTM 294
            +  +     ++      W +   +D  KA + + + R +++  A+    V   +L   M
Sbjct: 238 GQTRILSFSRVQGLPSVSWYVGISLDKAKAYAALASFRTSAVVAALTAVGVILLLLGMLM 297

Query: 295 RLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMN 354
           R++++PL  +  AM NI+ G  DLT R+   +  EF ++ ++FN FV  + + + EV   
Sbjct: 298 RVLMRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEFGELASAFNRFVERIHTSIREVSSA 357

Query: 355 SEKINCITTETQELVEVCNNSVA---DQYRELDMLASSMNEMVATSNQIAQITSEASEIT 411
           ++++N +      ++   N+S+A   +Q    + +A+++NE+ A + +IA+  ++AS+  
Sbjct: 358 TQQVNEVAAR---VLAASNSSMANSDEQASRTNSVAAAINELGAAAQEIARNAADASQQA 414

Query: 412 SKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTN 471
           S    Q  +G   V     ++  L  K+  + + I+ LN +T +I  IL+ I  I++QTN
Sbjct: 415 SGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALNAKTVDIGQILEVIKGISEQTN 474

Query: 472 LLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMD 531
           LLALNAAIEAARAGE GRGFAVVADEVR+LA +TQ S + I  +I  LQ  +  SV  M 
Sbjct: 475 LLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQEIQQMIEQLQVGAGASVQTMT 534

Query: 532 ESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINS------- 584
           ES   +  +++I+  + + L  ++Q + +I  +   VATA  EQ+ V E +N        
Sbjct: 535 ESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVATATEEQTAVIESLNMDITEINT 594

Query: 585 -NSISIKDKADTLSSLGNKISQQAYSQKALI 614
            N   +++   TL + G+ + QQA   K L+
Sbjct: 595 LNQQGVENLQSTLRACGD-LDQQARRLKQLV 624