Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 709 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  221 bits (564), Expect = 6e-62
 Identities = 158/498 (31%), Positives = 260/498 (52%), Gaps = 25/498 (5%)

Query: 152 KLMVTTSAPIYNKNDLTGVIFFDIPLDDVQELIKSYNPF---DAGTIFIVDNSGKII-FG 207
           +L+ + +API       G++  DI +D +Q+L+ S N      AG I ++ N+G++  + 
Sbjct: 210 QLLSSFNAPIIIDGKFHGIVGADIGVDFMQQLLSSANSQLYGGAGQIALISNNGRLAAYS 269

Query: 208 NKNDISGKNLFGDFDSFPLSVSESKTKDKNGVNYD------VLIKMSDFGG----WNLVS 257
              ++ GK      D+   ++ +     +     D       L     F G    W L+ 
Sbjct: 270 RDRNLLGKPAAQLLDADEQALVKQLPAGQTHYRIDHARGRVALFLPFSFPGTDARWVLML 329

Query: 258 IIDHDKARSDIITL--------RNNSIFTAVILASVFFAILL---FTMRLMLKPLHQLTD 306
            +   +   ++  L        R+N     VI   + FA LL      R + +PL  +  
Sbjct: 330 ELPTAEVMKELDQLMVALGEESRSNLAAMLVIGMLIAFAGLLAIWLISRRITRPLRDMVV 389

Query: 307 AMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQ 366
            + NIS G  DLT R+   +  E  +I   FN F+  LQ ++SEV  + +K++  +  T 
Sbjct: 390 MLDNISQGEGDLTQRLNIDSRNELGQIAAGFNAFLARLQGMISEVVSSVQKVSDASEHTA 449

Query: 367 ELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVS 426
           ++    +  V  Q  E++++A++++EM AT+  +A+  ++A+E  +  +   N+G   V 
Sbjct: 450 DIAIRTDKGVQTQLAEIELVATAVHEMTATAQDVARNATQAAEAANNADRAANQGRHIVQ 509

Query: 427 SVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGE 486
               ++  L  ++ +   V+Q L R ++NID IL  I  IA+QTNLLALNAAIEAARAGE
Sbjct: 510 DTGATIAELASEIGRAVDVVQTLARDSENIDAILVTIRSIAEQTNLLALNAAIEAARAGE 569

Query: 487 NGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISAD 546
            GRGFAVVADEVR+LA KTQ++T  I  +I  LQ  +   V VM++S N    ++  +  
Sbjct: 570 QGRGFAVVADEVRNLAQKTQQATGEIQQMIQQLQGGTRDVVQVMEQSQNRTRRSVEQADA 629

Query: 547 SKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQ 606
           + + L  I+Q+V  I D+ NQ+A+AA EQS V+E+IN N  +I   A  +++  ++ SQ 
Sbjct: 630 AAEALQAITQAVSLINDMNNQIASAAEEQSAVAEDINRNVTNIGQVAQQVAAGADEASQA 689

Query: 607 AYSQKALIGHQDDLISKF 624
           +     L   Q  LI++F
Sbjct: 690 SAGLTRLAEQQRRLINQF 707