Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 531 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  180 bits (457), Expect = 1e-49
 Identities = 117/331 (35%), Positives = 177/331 (53%), Gaps = 12/331 (3%)

Query: 294 MRLMLKPLHQLTDAMVNISSG--SADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEV 351
           M  ++  + +L   +  +S G  SA L VR     D E   I  ++N  +G +  ++  V
Sbjct: 198 MNWLMLQIDELRGRLEKVSQGDFSAPLQVR---HADDEMGMITLAYNRLLGQVGEMIKGV 254

Query: 352 KMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASEIT 411
           +  ++  +        L      +V  Q  E+D +A++MNEM+ATS+++A+ T EA+   
Sbjct: 255 RQAADDADAQCVRMAGLAGDSARNVEGQQAEIDQVATAMNEMLATSHEVARSTVEAANAA 314

Query: 412 SKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTN 471
                + N G   ++    ++  L   +D    V+Q L + +  I  +L  I+ IA+QTN
Sbjct: 315 DVAEQETNAGSTVMNESVGAIRTLSGHVDGLSDVMQQLVQDSHEIGKVLNVISGIAEQTN 374

Query: 472 LLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMD 531
           LLALNAAIEAARAGE GRGFAVVADEVRSLA +TQ S K +G ++  LQ  +  + H MD
Sbjct: 375 LLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQSSAKEVGVLVERLQSQATRAGHAMD 434

Query: 532 ESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKD 591
            S   ++ T+T    ++  L  I  +V  I  +TNQ+ATAA EQS V+E++N +   I  
Sbjct: 435 ASRQSSATTLTQIEAAQHALGQIVGAVQTIRGMTNQIATAAEEQSQVAEDMNQSLTRIAQ 494

Query: 592 KADTLSSL-------GNKISQQAYSQKALIG 615
            AD  + +       GN I Q     K+L G
Sbjct: 495 VADQAAGVTQDTAASGNTIMQSMKGLKSLTG 525