Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 489 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  178 bits (451), Expect = 6e-49
 Identities = 111/313 (35%), Positives = 179/313 (57%), Gaps = 2/313 (0%)

Query: 279 AVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFN 338
           AV++  +  A  L  +R +L  L+ L D M+++   S DL  R+P  +  E  ++ ++FN
Sbjct: 144 AVLMLGLLAASQLL-IRFLLSHLNTLKDVMLHVER-SGDLQARVPLDSRDEVGQMASAFN 201

Query: 339 IFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSN 398
              G  Q +VS V   + +++   +     +   +  +  Q  E D  A+++NEM AT +
Sbjct: 202 AMQGGYQRVVSTVAQAAARLDEGASRLATSMNDVHKGMRGQQGETDQAATAINEMSATVH 261

Query: 399 QIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDV 458
           QIA+   E  + +   +    +G   V  V +S+ +L + + +T  +I+ L   +Q I+ 
Sbjct: 262 QIAEHARETRDQSQNADRLAGDGHRVVGRVEKSISSLSQGVQQTGEMIEQLAADSQRING 321

Query: 459 ILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHI 518
           ++  I+ IA+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA + Q+ST  I  +I  
Sbjct: 322 VVNVIHSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRNLAKRVQDSTDEITQMISG 381

Query: 519 LQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHV 578
           LQ  +  +V  M ES   A + +  + D+ Q L+ I+ +V Q+ +   Q+A AA +QS V
Sbjct: 382 LQSMTRDAVEFMQESSLKADDCVREAHDAAQALEAIADAVAQMRESNTQIAVAAEQQSQV 441

Query: 579 SEEINSNSISIKD 591
           +EE+N +   I+D
Sbjct: 442 AEELNRSVTGIRD 454