Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 676 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  176 bits (446), Expect = 3e-48
 Identities = 108/334 (32%), Positives = 183/334 (54%), Gaps = 5/334 (1%)

Query: 265 RSDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISS--GSADLTVRI 322
           R D + L+   +    ++  +   +LL+    + + L    D+++ ++   G  DL+ R+
Sbjct: 314 RYDALVLQREVVIAMCVIMGL---LLLYAFCSIYRALRLTIDSLLGVTRRLGEGDLSARV 370

Query: 323 PNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRE 382
              +  E + I N  N+      S +S +   S ++  + +     + +   S+  Q  E
Sbjct: 371 AVVSKDEVADIANGLNLMADAFASSISHMDRTSYELTDVASRLGASIGLAKQSMNAQQAE 430

Query: 383 LDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKT 442
            + +A+++NEM A+   +AQ T  A+    + N     G+  +     ++  L E+++ +
Sbjct: 431 TEQVATAINEMTASVADVAQNTEGAALAADEANTASRNGLRIMHQAHSTIQALAEEVELS 490

Query: 443 KSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLA 502
              +Q L   +Q+I  +++ I+ IADQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA
Sbjct: 491 AQKVQALALHSQSIGGVIQVISTIADQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLA 550

Query: 503 IKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIV 562
            +TQ ST+ I  II  LQ  +  +V  M      A   ++ ++D+   L +ISQ V +IV
Sbjct: 551 SRTQASTEEIRGIIQQLQSATDAAVQQMQAGQQKAHACISAASDASGSLSSISQGVERIV 610

Query: 563 DITNQVATAAYEQSHVSEEINSNSISIKDKADTL 596
           ++  Q+A+AA +Q  VSE+IN N + I++ + TL
Sbjct: 611 EMNTQIASAAVQQHAVSEDINRNVMEIRNSSGTL 644