Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  182 bits (462), Expect = 3e-50
 Identities = 113/364 (31%), Positives = 201/364 (55%), Gaps = 9/364 (2%)

Query: 261 HDKARSDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTV 320
           +DK+R DI+      I   VI A     + L+  R ++ PL +   A   +++G  DLT 
Sbjct: 185 YDKSR-DIV------IIFVVIAALCTIGLALWLTRSIVGPLQRAVTAAEQVANG--DLTH 235

Query: 321 RIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQY 380
            I    + E ++++ +  +   NL+  +  +  ++ ++    TE   + E     +  Q 
Sbjct: 236 TIEVDGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNSVTEDSYRGLNQQN 295

Query: 381 RELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLD 440
            E+D  A+++NEM +   ++A+     S+ +++ +     G   V    +S+  L + + 
Sbjct: 296 AEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIETVQSIQTLTDNVQ 355

Query: 441 KTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRS 500
            T +++Q+L  Q+Q+I  +L  I  IA+QTNLLALNAAIEAARAGE+GRGFAVVADEVR+
Sbjct: 356 ATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGESGRGFAVVADEVRA 415

Query: 501 LAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQ 560
           LA +TQ+ST  I S++  ++  S  ++  M+ S   A  T+ ++  + + L  I+ S+ Q
Sbjct: 416 LAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGAGESLSEITSSINQ 475

Query: 561 IVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDL 620
           I +    +A+AA EQ+ VS E++ N ++I+D +   +   N+IS  ++    L    + +
Sbjct: 476 ISERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASSHELSRLAADLNQV 535

Query: 621 ISKF 624
           +S+F
Sbjct: 536 VSRF 539