Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  179 bits (453), Expect = 5e-49
 Identities = 113/352 (32%), Positives = 186/352 (52%), Gaps = 4/352 (1%)

Query: 275 SIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKII 334
           S+   V+L  +F A L+   R +  PL+    A   I+ G  DLT     +   E   + 
Sbjct: 334 SVALVVLLVGIFAAFLI--TRQITVPLNSTVIAARRIADG--DLTHDSSTTRQDELGLLQ 389

Query: 335 NSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMV 394
           N+      +L+ ++  +     +I     +   + E  +  V  Q  E+D +A++MNEM 
Sbjct: 390 NTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQVATAMNEMA 449

Query: 395 ATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQ 454
           +T  ++A+ T +AS+   + + +   G   V   T  +G L  ++ +    +Q L   + 
Sbjct: 450 STVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAMQRLTEDSG 509

Query: 455 NIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGS 514
            I  ++  I  +A+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA +TQ ST  I +
Sbjct: 510 KIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQNSTTEIEA 569

Query: 515 IIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYE 574
           +I  LQ+ +  +  +MD S      T+ ++  ++Q L  I+QS+  I  ++ Q++ AA +
Sbjct: 570 LIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQQISAAAEQ 629

Query: 575 QSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKFII 626
           QS V+EEIN + +S++D AD  +S   + +        L      ++++F I
Sbjct: 630 QSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFKI 681