Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  194 bits (494), Expect = 8e-54
 Identities = 162/639 (25%), Positives = 290/639 (45%), Gaps = 35/639 (5%)

Query: 6   KLLMIFTSIIITISSILTYFQMHGTNEYLD-RTIKDTISETLDSLEDKINLSIESKVDVS 64
           K+L+  +  +I  +  +     H   + ++ R +   +   + S+ +++   + S ++ +
Sbjct: 11  KILLTVSLAVILSTVAVGLLGQHSARDVVEQRMLGSEMPAKMLSIRNELEKDMVSLLNAA 70

Query: 65  KSVID--IYENLLEGESPLSKFKDVDVNHLSNVFQLF-----GYADERTGEIITNDPNFK 117
           K + D  +    LE   P      V V+ L +V   +      YAD  TG   T     +
Sbjct: 71  KQLADSRMLGKWLEQGRPAEDESRV-VSQLQDVASQYQLAQASYADRETGAYYTQSGFLR 129

Query: 118 VPTGFDPRTRSWYLNAK------KLNTFSLSEPYVDLITEKLMVTTSAPIYNKNDLTGVI 171
           + T   P    W+ + +      +LN F+ +   V L             Y + +  G+ 
Sbjct: 130 ILT---PEQDGWFFDYRSSGVQQRLNVFTEANGDVKLFIN----------YQQLNGRGLA 176

Query: 172 FFDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIF----GNKNDISGKNLFGDFDSFPLS 227
                LD + + + S+   ++G +++VD  G++      G     +  +L+G   S  LS
Sbjct: 177 GLAKSLDAMVQRLTSFKLEESGFVYLVDAKGEVQLHSDPGKIRKATLNSLYGKSGSL-LS 235

Query: 228 VSESKTKDKNGVNYDVLIKMSDFGG--WNLVSIIDHDKARSDIITLRNNSIFTAVILASV 285
            ++    +       +++  S      W LV+ +   +  + +       +F+ +++A  
Sbjct: 236 RADFNYMEVEVDGQPMMVASSYLPSIDWYLVAQVPEAEVFALLDEAALKILFSTLLIALA 295

Query: 286 FFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQ 345
           F  +  F    + KP+  +     +I  G  DL  R+P   + E +++ + FN F+  +Q
Sbjct: 296 FVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGEDELAQLASGFNSFISKIQ 355

Query: 346 SIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITS 405
             V EV   SE++     +     +       DQ      + +++NEM AT N+IA   +
Sbjct: 356 DSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAINEMGATVNEIAANAA 415

Query: 406 EASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAIND 465
           +A+E     +     G   V+   +++  L + + +   VI+ L   T++I  IL  I  
Sbjct: 416 QAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLATHTKSIGSILDVIRA 475

Query: 466 IADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLL 525
           I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +T  ST  +  +I  LQ  S  
Sbjct: 476 ISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDEVQVMIDKLQSESAR 535

Query: 526 SVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSN 585
           +V+ M +S + + E ++   ++   L  IS  +  I D+  QVA A  EQS V E+IN N
Sbjct: 536 AVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAATEEQSTVVEDINRN 595

Query: 586 SISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKF 624
              I D     ++     ++ +    AL    D L+++F
Sbjct: 596 VTEINDITQRTAATAQAAARASKDLNALATRLDQLVARF 634