Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  202 bits (515), Expect = 3e-56
 Identities = 154/536 (28%), Positives = 256/536 (47%), Gaps = 44/536 (8%)

Query: 122 FDPRTRSWYLNAKKLNTFSLSEPYVDLIT---EKLMVTTSAPIYNKNDLTGVIFFDIPLD 178
           F  R   WYL AK      L EPY+  IT     LM + + PI       GV+  D+ L 
Sbjct: 178 FGLREAEWYLCAKDTQKPCLMEPYLYEITPGNNMLMTSLTVPIVRGGRFRGVVGVDLNLP 237

Query: 179 DVQELIKSYNPF---DAGTIFIVDNSGKIIFGNKNDISGKNL--------------FGDF 221
             Q++I+  +         + ++   G I+  +  D   + L               G  
Sbjct: 238 VFQKMIEELSASLYQGQAKVTLLSTKGLIVAASHYDKKARPLGEAIDKSLANQILGLGKG 297

Query: 222 DSFPLSVSESKTKDKNGVNYDVLIKMSDFGGWNLVSIIDHDKARSDIITLRNNS------ 275
           D + L+ S         V Y + I +S    W L   +    A +    +  +       
Sbjct: 298 DGYLLNDSSMI------VAYPINIPLSG-SQWLLAIEVPRQIALASAEQVEGSMQAMAAS 350

Query: 276 -----IFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEF 330
                +   + +A+V   ++   +R ++ P+ Q+   +  ++S   DLT  +      E 
Sbjct: 351 LGRFVLLLGIGIAAVAVILIALFIRSVVAPIQQIQQRVSQLASAEGDLTQSLKVDEHAEL 410

Query: 331 SKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSM 390
             + N FN F+G L  ++SE+K  + +    +  T  + E    SV  QY E++ + +++
Sbjct: 411 IALGNGFNAFIGKLHGLISELKKVATESRNESQATARIAEETKQSVNRQYSEIESVVTAV 470

Query: 391 NEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLN 450
           NEM  T++++A+ + + +  ++ +  QV     +++     V  + ++  + K  +  + 
Sbjct: 471 NEMSHTAHEVAKASEQTASESAAMASQVKVSQDSLTQAVSLVSTMSKESLQAKIAVGKVA 530

Query: 451 RQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTK 510
             + NI  IL+ I+ IA QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA KTQ ST 
Sbjct: 531 ESSTNISKILEVISAIAAQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASKTQASTD 590

Query: 511 NIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQV-- 568
           +I  +I  L++    +  ++D+   +A + +   A ++Q  + +S  V  I +I+NQV  
Sbjct: 591 DISRLIDALEQEVKGASGIIDKGVGLAEQAV---AQTEQAFEALSVMVAGINEISNQVTQ 647

Query: 569 -ATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISK 623
            ATAA EQS V+EE++ N   I D A  L  L  K  + + S   L+G Q+  ++K
Sbjct: 648 IATAAEEQSAVTEEVSRNITGISDSAAELMDLAGKARESSESLAKLVGRQESQLAK 703