Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  183 bits (465), Expect = 1e-50
 Identities = 124/371 (33%), Positives = 188/371 (50%), Gaps = 9/371 (2%)

Query: 262 DKARSDIITLRNNSIFTAVILASVFFAILLFTM------RLMLKPLHQLTDAMVNISSGS 315
           D  R  + TL ++S+   + LA   FA+L+ +       R ++ P+ ++   +  I   S
Sbjct: 174 DLEREQVETLHSSSLKWFIGLA--VFAVLITSFFGVWVNRGVMTPVTEIRQKLRQIREKS 231

Query: 316 ADLTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNS 375
            D+TV      D E   I    N  V +L+ I+  +   +  +     E  E     N+ 
Sbjct: 232 -DMTVSFTVFRDDELGHIAKDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDR 290

Query: 376 VADQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNL 435
           +  Q  E +  A++MNEM A   ++AQ ++ A+E     +     G   V     S+  L
Sbjct: 291 MFKQQSETEQTATAMNEMTAAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVL 350

Query: 436 VEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVA 495
             ++  T +VI +L  ++QNI  +L  I  IA+QTNLLALNAAIEAARAGE GRGFAVVA
Sbjct: 351 ASQIQGTAAVIGELATESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVA 410

Query: 496 DEVRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNIS 555
           DEVR+LA +T EST+ I S+I  LQ+    +V+ M++           +  +   L +I 
Sbjct: 411 DEVRTLAQRTSESTREIESMIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIV 470

Query: 556 QSVIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIG 615
            SV  I  +   +ATAA EQS V+E IN + I+I D A   +   N +S+  +    L G
Sbjct: 471 ASVDSITQLNTHIATAADEQSCVAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAG 530

Query: 616 HQDDLISKFII 626
           H    +  FI+
Sbjct: 531 HMRTQVGTFIL 541