Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 665 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  195 bits (495), Expect = 6e-54
 Identities = 146/566 (25%), Positives = 267/566 (47%), Gaps = 65/566 (11%)

Query: 85  KDVDVNHL----SNVFQLFGYADERTGEIITNDPNFKVPTGFDPRTRSWYLNAKKLNTFS 140
           KD D+  +    +N F+ F       G     DPN+          R W+  A       
Sbjct: 111 KDADIKSVFFGSANTFEYFDLNGRYDG-----DPNYYT------NKRPWWQEALDKGGLF 159

Query: 141 LSEPYVDLITEKLMVTTSAPIYNKN-DLTGVIFFDIPLDDV-QELIKSYNPFDAGTIFIV 198
           + +P VD     +  T   P+Y  N  L G+   DI +D + + L+       +G  F++
Sbjct: 160 VGDPAVDANDGSISATVKTPVYGANGQLLGIGGMDILIDTIGKSLLAPIKYQGSGQAFLM 219

Query: 199 DNSGKIIFGNKNDISGKNLFGDFDSFPLSVSESKTKDKNGVNYDVL-------------- 244
              GK+++       G N     +SFP   +  K  +     +  L              
Sbjct: 220 TGDGKLVY-----FPGFN-----ESFPPGSAIQKVDNNGSEGFTALGQLMQRQSSGFTDV 269

Query: 245 --------IKMSDFGG------WNLVSIIDHDKARSDIITLRNNSIFTAVILASVFFAIL 290
                   +   +  G      W+L  ++ H+   + +     ++ + A +++     ++
Sbjct: 270 VYQGSPQRVAFVEVAGDYPKQKWHLAFMLPHEVIEAPV----RDAFWNACLMSLGIILLV 325

Query: 291 LFTMRLMLKPLHQ----LTDAMVNISSGSADLTVRIPNSTDQEFSKIINSFNIFVGNLQS 346
             T+ L+L PL +    L  AM N++SG  DL+ RI    + E   + ++FN F   +Q 
Sbjct: 326 GVTVWLLLLPLRRQLESLLGAMDNMASGEGDLSRRIDIQREDELGLMADAFNRFAAKVQQ 385

Query: 347 IVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSE 406
           ++ + +  +  ++    E +++ +V   +V+ Q  ++D +A++  EM  TS ++A     
Sbjct: 386 MLRQTRDLTRDVDDGIVEARKICDVAVGAVSRQKAQIDSVAAAAIEMAHTSQEMAASAQR 445

Query: 407 ASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDI 466
            ++       Q ++G   V+  T  +  L  ++ +  +VI++L   ++ I  +L  I +I
Sbjct: 446 TADFAETAQTQADDGKQIVAEATSGIETLSSRVIEAAAVIKELRGSSEKIGEVLSVIRNI 505

Query: 467 ADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLS 526
           A+QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA +TQ+ST NI  II  LQ++++ +
Sbjct: 506 AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQDSTANIQGIIQRLQQSAMEA 565

Query: 527 VHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNS 586
             VM+   N A     +++  +  L  I+ ++  I+  T ++  A  +Q+ V++E+  N 
Sbjct: 566 ESVMEAGVNDAKRGQLLTSQVQDSLGKITDAIGAILQQTTEITVAIGQQAVVADEVAQNV 625

Query: 587 ISIKDKADTLSSLGNK--ISQQAYSQ 610
            +++  +D   S   +  +S +A+ Q
Sbjct: 626 ENVRGLSDDSHSASQELAVSLKAFEQ 651