Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  201 bits (510), Expect = 1e-55
 Identities = 122/330 (36%), Positives = 185/330 (56%), Gaps = 4/330 (1%)

Query: 264 ARSDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIP 323
           A S  +T+   SI   +++  V     L  +R +++P+ +++DA+  I + + DLT+R  
Sbjct: 262 AESATVTI---SIVVFILITLVLIGFTLAIIRSIMEPVQRISDAISRIEA-TKDLTLRCD 317

Query: 324 NSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYREL 383
              D E  +I   FN  V + QS++ EV  + E +N    E  E     +  V  Q  E 
Sbjct: 318 TKVDDEIGQIARHFNSMVESFQSLIREVLTSVEVVNHSCQELSENSMRASEGVGRQLNET 377

Query: 384 DMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTK 443
           DM+A+++ EM AT ++IA  T  A+E     +    +G   V    E +  L  +L  + 
Sbjct: 378 DMVATAITEMGATIDEIASNTELAAERAGNTHDNAQQGQVGVEHTIEKIQALAAQLTDSA 437

Query: 444 SVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAI 503
            V+ +L + ++ I  +L  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA+
Sbjct: 438 QVVSELEKDSETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAM 497

Query: 504 KTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVD 563
           +TQEST+ I  II  LQ  +   V +M+ +     E+   +A +   L+ I+  V  I+D
Sbjct: 498 RTQESTEEIAGIIQTLQSRTRSIVQLMEATQRQGIESADQAASAGALLEQINADVTNIMD 557

Query: 564 ITNQVATAAYEQSHVSEEINSNSISIKDKA 593
           ++ Q+A A  EQS V+ E+N N + I+D A
Sbjct: 558 MSTQIAAAIEEQSMVASEVNKNVVVIRDIA 587