Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 662 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella loihica PV-4

 Score =  184 bits (467), Expect = 1e-50
 Identities = 120/367 (32%), Positives = 195/367 (53%), Gaps = 1/367 (0%)

Query: 258 IIDHDKARSDIITLRNNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSAD 317
           + D   A ++  +L  + I   ++   V   + LF  R +   L  L   +   S    D
Sbjct: 296 LTDTRSALANAKSLMVSVIVLMLVSGLVVILLSLFIGRYLHASLRHLYHKVTE-SQKHYD 354

Query: 318 LTVRIPNSTDQEFSKIINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVA 377
           L+VR+      E  ++ ++FN  + + + ++  V+ N++ +   + E +    +    VA
Sbjct: 355 LSVRVDLKGKDEIGQLGSAFNHMMADFEKVIGMVRTNTQGLLTASQEMEGCARIMREDVA 414

Query: 378 DQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVE 437
             + E+D +AS+M EM AT  +IAQ   +ASE +++ N +  EG   V    +S+  L +
Sbjct: 415 LGHSEVDQVASAMTEMSATVQEIAQNAVQASEASAQANKEAKEGSLEVERTADSINELAQ 474

Query: 438 KLDKTKSVIQDLNRQTQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADE 497
           ++      I +L+   + I  +L  I+ IA+QTNLLALNAAIEAARAGE GRGFAVVADE
Sbjct: 475 EIADAAQAINNLDEDIKGIVDVLGVISGIAEQTNLLALNAAIEAARAGEMGRGFAVVADE 534

Query: 498 VRSLAIKTQESTKNIGSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQS 557
           VRSLA + Q ST++I S+   L+  + ++V  M+   N A  ++  S  + + L  I   
Sbjct: 535 VRSLAQRAQTSTEDIRSMTERLERGAKIAVKAMESGRNKAEISVVESKRAGEELIRIVSE 594

Query: 558 VIQIVDITNQVATAAYEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQ 617
           V  I  +  Q+A A +EQS VSEE+N N++ I D       + +++SQ   S    +   
Sbjct: 595 VSVIDSMNEQIAAATHEQSAVSEEVNQNAMKISDIYRNTHEVSDRLSQLNESLLNDVSAM 654

Query: 618 DDLISKF 624
            +L+SKF
Sbjct: 655 SELVSKF 661