Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 695 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  177 bits (449), Expect = 1e-48
 Identities = 157/571 (27%), Positives = 248/571 (43%), Gaps = 84/571 (14%)

Query: 114 PNFKVPTGFDPRTRSWYLNAKKLNTFSLSEPYVDLITEKLMVTTSAPIYN--------KN 165
           P   +P G+DPR R WY  A       L      +I++  M TT  P+ +        + 
Sbjct: 134 PEDSLPAGYDPRKRPWYKEA-------LGSGEDSIISKAYMSTTRVPVSSVVAKVFDAQR 186

Query: 166 DLTGVIFFDIPLDDVQELIKSYNPFDAGTIFIVDNSGKIIFGNKNDI--------SGKNL 217
            + G I  DI L  +  +  + +    G + +V+++G II   K++         +G   
Sbjct: 187 RVVGAIGIDINLSTLTRVTSALHIGQTGYVMLVEDTGIIISDPKHEQFAFKNITETGTPA 246

Query: 218 FGDFDSFPLSVSESKTKDKNGVNYDVLIKMSDFGGWNLVSIIDHD----KARSDIITLRN 273
           F         + E     K+ +       ++ + GW LVS+ID D    KARS + T+  
Sbjct: 247 FTRIMGMKRGMFEDSLDGKDRI----FTVVTGYLGWKLVSVIDADEVYGKARSLVFTI-- 300

Query: 274 NSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSKI 333
             +     +A V  A+  F  R + +P+  L +A   ++ G+ +  +        E   +
Sbjct: 301 --VSIGFGIALVLLAVAWFIARSVAEPIRMLVEASGEVARGNFN-ALPSERHFSGELLTL 357

Query: 334 INSFNIFVGNLQSIVSEVKMNSEK------------------------------------ 357
             S N  V  L ++VS  +  +++                                    
Sbjct: 358 RGSLNDMVTQLGNLVSTAETKTQEAEEQARKAGEALTQAEEARRAGEVARREGIMQTAGR 417

Query: 358 ----INCITTETQELV----EVCNNSVADQYRELDMLASSMNEMVATSNQIAQITSEASE 409
               ++ IT+ +QEL     E    S   + R  +  A++M EM A+  ++A   S A+E
Sbjct: 418 LESIVDQITSASQELASQIGEATRGSDIQRARTTE-AATAMEEMNASVLEVASNASRAAE 476

Query: 410 ITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQTQNIDVILKAINDIADQ 469
                  +   G G V  V  S+G +     +    + DL +Q + I  I+  I DIADQ
Sbjct: 477 SAEHARKEAEGGGGIVRDVVSSIGEVNRFAAEMGGSLDDLGKQAEGIGHIMTVITDIADQ 536

Query: 470 TNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNIGSIIHILQENSLLSVHV 529
           TNLLALNAAIEAARAGE GRGFAVVADEVR LA KT  +TK +G  I  +Q  +  ++  
Sbjct: 537 TNLLALNAAIEAARAGEAGRGFAVVADEVRKLAEKTMTATKEVGDAIGAIQRGTRNNIDG 596

Query: 530 MDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAAYEQSHVSEEINSNSISI 589
           M  +  + S++  +++ +   L  I   V    D    +ATA+ EQS  SEEIN ++  +
Sbjct: 597 MSRASGVISQSTDLASRAGDALGRIVNIVESTADQVRSIATASEEQSAASEEINRSTEEV 656

Query: 590 KDKADTLSSLGNKISQQAYSQKALIGHQDDL 620
              A   S +   +SQ A +   L     DL
Sbjct: 657 NRIA---SEMAEAMSQSAVAVNELARLAADL 684



 Score = 26.9 bits (58), Expect = 0.003
 Identities = 21/78 (26%), Positives = 36/78 (46%), Gaps = 14/78 (17%)

Query: 375 SVADQYRELDMLASSMNEMVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGN 434
           S ADQ R +   A++  E  A S +I + T E + I S++   +++   AV+ +     +
Sbjct: 627 STADQVRSI---ATASEEQSAASEEINRSTEEVNRIASEMAEAMSQSAVAVNELARLAAD 683

Query: 435 LVEKLDKTKSVIQDLNRQ 452
           L           QD+ RQ
Sbjct: 684 L-----------QDIIRQ 690