Pairwise Alignments

Query, 626 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 620 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  203 bits (516), Expect = 2e-56
 Identities = 128/354 (36%), Positives = 193/354 (54%), Gaps = 1/354 (0%)

Query: 273 NNSIFTAVILASVFFAILLFTMRLMLKPLHQLTDAMVNISSGSADLTVRIPNSTDQEFSK 332
           N  I   VI+A +   I    +R ++ P+ ++T  +  I   S DLT+R   ST  E  +
Sbjct: 268 NIGILVFVIIALILAVITYLIIRSIITPVERITQVISRIEV-SKDLTLRCDASTQDELGE 326

Query: 333 IINSFNIFVGNLQSIVSEVKMNSEKINCITTETQELVEVCNNSVADQYRELDMLASSMNE 392
           I   FN  VG+ Q ++ +V  +   IN       E   + +  VA Q  E DM+A+++ E
Sbjct: 327 IAQHFNSMVGSFQQLIEQVIDSVATINTSCKSVSENAMLASEGVAQQLNETDMVATAITE 386

Query: 393 MVATSNQIAQITSEASEITSKINGQVNEGVGAVSSVTESVGNLVEKLDKTKSVIQDLNRQ 452
           M AT ++IA+ T  A+    K +     G   V      +  L E+++ + SV+ +L R 
Sbjct: 387 MGATIDEIAKTTELAALKAGKTHDNAQLGQTEVEQTILKIRQLSEQINSSASVVDELERD 446

Query: 453 TQNIDVILKAINDIADQTNLLALNAAIEAARAGENGRGFAVVADEVRSLAIKTQESTKNI 512
           ++ I  +L  I  IA+QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA++TQ ST+ I
Sbjct: 447 SETIGSVLDVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAMRTQTSTQEI 506

Query: 513 GSIIHILQENSLLSVHVMDESFNIASETMTISADSKQCLDNISQSVIQIVDITNQVATAA 572
            +II  LQ  +   V +MD S    +E+   +A + + L  I+  V  I+D++ Q+A A 
Sbjct: 507 ANIIQTLQSRTRAIVQLMDASQKQGAESAEQAAAAGELLKLINTDVHNIMDMSTQIAAAI 566

Query: 573 YEQSHVSEEINSNSISIKDKADTLSSLGNKISQQAYSQKALIGHQDDLISKFII 626
            EQS V+ E+N N + I+D A+  S   +  +  +   K+   +    +S F I
Sbjct: 567 EEQSMVAAEVNKNVVVIRDIAEDSSRAADANASASDELKSRAEYLVSAVSHFKI 620