Pairwise Alignments

Query, 253 a.a., type 4 prepilin-like proteins leader peptide-processing enzyme from Vibrio cholerae E7946 ATCC 55056

Subject, 304 a.a., prepilin peptidase (RefSeq) from Shewanella amazonensis SB2B

 Score = 96.7 bits (239), Expect = 5e-25
 Identities = 81/272 (29%), Positives = 121/272 (44%), Gaps = 37/272 (13%)

Query: 3   YVYLILFSIVSLILGSFSNVVIYRLPR----------------------KILLKNHFFYD 40
           +++++L  + +  +GSF NVVI+RLP                       K L K +    
Sbjct: 13  WLFILLAFLFAATIGSFLNVVIHRLPVMMKREWQQECNAYLEEYQPELVKKLGKANLDKP 72

Query: 41  IDSNR---------SMCPKCGNKISWYDNVPLLSYLLLHGKCRHCDEKISLSYFIVELSF 91
           IDS           S CPKCG  I  + N+P+L +++L GKC  C   IS  Y IVE   
Sbjct: 73  IDSYPERYNLIVPGSSCPKCGTIIKPWHNLPVLGWIILGGKCASCKAPISSRYPIVEAFT 132

Query: 92  FIIAFPIYW-LSTDWVDSFVLLGLY-FILFNLFVIDFKSMLLPNLLTYPIFMLAFIYVQQ 149
            +    + W     W   FV   L  F L  +  ID   MLLP+ LT P+  L  +    
Sbjct: 133 GLTVAALAWHFGPTW--QFVTAALLTFGLIAMSGIDLDEMLLPDSLTLPLLWLGLLLNYH 190

Query: 150 NPALTVESSIIGGFAAFIISYVSNFIVRLFKRIDVMGGGDIKLYTAIGTLIGVEFVPYLF 209
               T+E ++IG  A ++  +   ++ +L    + MG GD KL    G  +G + +P + 
Sbjct: 191 GLFTTLEDALIGAAAGYLSLWSVYWLFKLTTGKEGMGYGDFKLMGLFGAWLGWQMLPLII 250

Query: 210 LLSSIIAFIHWFFARV--SCRYCLYIPLGPSI 239
           LLSS++  +      V  S +    IP GP I
Sbjct: 251 LLSSLVGAVVGILMMVWKSHKRENPIPFGPYI 282