Pairwise Alignments

Query, 253 a.a., type 4 prepilin-like proteins leader peptide-processing enzyme from Vibrio cholerae E7946 ATCC 55056

Subject, 308 a.a., type 4 prepilin-like proteins leader peptide processing enzyme (NCBI ptt file) from Shewanella oneidensis MR-1

 Score = 98.6 bits (244), Expect = 1e-25
 Identities = 74/273 (27%), Positives = 121/273 (44%), Gaps = 39/273 (14%)

Query: 3   YVYLILFSIVSLILGSFSNVVIYRLPRKILLKNHFF------------------------ 38
           ++++ L  + +  +GSF NVVI+R P  +++K  +                         
Sbjct: 17  WLFISLSFVFAATIGSFLNVVIHRFP--VMMKREWQQECNQYLQEYHADIVKQVGIDKLS 74

Query: 39  ---------YDIDSNRSMCPKCGNKISWYDNVPLLSYLLLHGKCRHCDEKISLSYFIVEL 89
                    Y++    S CPKC   I  + N+P+L +L+L GKC  C   IS  Y I+EL
Sbjct: 75  KAIDHYPPKYNLVVPGSACPKCKTAIKPWHNLPMLGWLMLRGKCAACSAPISARYPIIEL 134

Query: 90  SFFIIAFPIYW-LSTDWVDSFVLLGLYFILFNLFVIDFKSMLLPNLLTYPIFMLAFIYVQ 148
              ++   + W     W   F  + L F+L  L  ID   MLLP+ +T P+  L  +   
Sbjct: 135 ITGLLVATLAWHFGPSWQFVFAAI-LTFVLIALTGIDLDEMLLPDQMTLPLLWLGLLINL 193

Query: 149 QNPALTVESSIIGGFAAFIISYVSNFIVRLFKRIDVMGGGDIKLYTAIGTLIGVEFVPYL 208
            +   +   ++IG  A ++  +   ++ +L    + MG GD KL    G  +G + +P +
Sbjct: 194 NHTFTSPADAMIGAAAGYLSLWSIFWLFKLLTGKEGMGYGDFKLLAVFGAWLGWQMLPLV 253

Query: 209 FLLSSIIAFIHWFFARVSCRYCLY--IPLGPSI 239
            LLSS++         V+ R  L   IP GP I
Sbjct: 254 ILLSSLVGAFVGITLIVTKRNQLANPIPFGPYI 286