Pairwise Alignments

Query, 340 a.a., toxin coregulated pilus biosynthesis protein E from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Type IV fimbrial assembly protein PilC from Pseudomonas fluorescens FW300-N2E2

 Score = 64.3 bits (155), Expect = 5e-15
 Identities = 68/334 (20%), Positives = 147/334 (44%), Gaps = 12/334 (3%)

Query: 16  LVDLLNDNIPLYDALNKIQNEGVGIYDKNFIKSIELIKDRMKSNSSLTDALTGLIPDKEV 75
           +  +L   +PL  A + I   G G  + +  K ++ +K  + + +S   AL       + 
Sbjct: 75  MATMLKAGVPLLQAFDII---GEGFDNPSMRKLVDEVKQEVAAGNSFAAALRKCPQYFDE 131

Query: 76  L---MINVAENSGKISSGIAAIRKNIIDADEIKSKAISSMITPSVMLIVTMVVIAGYSVK 132
           L   +++  E +G + + +  +      ++ +K+K   +M  P+ +++V  VV     VK
Sbjct: 132 LYCNLVDAGEQAGALDTLLDRVATYKEKSEALKAKIKKAMTYPAAVVLVAAVVTGILLVK 191

Query: 133 VFPTFESVLP--VSRWPGVTQALYNLGFSLYEGLWIKVLIFVAIFITILVFMSKNIT-GN 189
           V P FESV     ++ P  T  +  L   + +  W+ +   +  F  +   + ++    +
Sbjct: 192 VVPQFESVFSGFGAQLPAFTVMVIGLSEIMQQWWWVMLGGLMGAFFGVKYALRRSERFRD 251

Query: 190 FRDGFLDKLPPFNFVKH-IAATEFLANMSMLLDSRVPFKEGLDIVDHKTTRWLSSH-LQR 247
           +RD +L KLP    + +  A   +   +S    + VP  E LD V   T   +  H +QR
Sbjct: 252 WRDKWLLKLPLIGTLLYKSAVARYARTLSTTFAAGVPLVEALDSVSGATGNVVFKHAVQR 311

Query: 248 MKANMQEGLDYKQALDTNLLDKKMLLTM-AVYSELPNFSDVMQKLAIEANINLHKKIATL 306
           +K  +  G+    ++  + +   + + M A+  E     D++ K+A      +   +  L
Sbjct: 312 IKQEVSTGMQLNFSMRASGIFPNLAVQMTAIGEESGALDDMLDKVASFYEAEVDNLVDNL 371

Query: 307 AGVMKNISLITLALSVIWIFGAIFSLVDKLSSSL 340
             +M+   ++ L + V  +  A++  + +L S++
Sbjct: 372 TSLMEPFIMVVLGVVVGGLVVAMYLPIFQLGSAI 405