Pairwise Alignments

Query, 340 a.a., toxin coregulated pilus biosynthesis protein E from Vibrio cholerae E7946 ATCC 55056

Subject, 405 a.a., Type II secretory pathway, component PulF from Pseudomonas stutzeri RCH2

 Score = 52.0 bits (123), Expect = 3e-11
 Identities = 66/334 (19%), Positives = 141/334 (42%), Gaps = 16/334 (4%)

Query: 16  LVDLLNDNIPLYDALNKIQNEGVGIYDKNFIKSIELIKDRMKSNSSLTDALTG---LIPD 72
           +  ++   +PL  + + I   G G  + N  K ++ +K  + + +S   AL        D
Sbjct: 75  MATMMKAGVPLLQSFDII---GEGFDNPNMRKLVDDLKQEVAAGNSFATALRKKPQYFDD 131

Query: 73  KEVLMINVAENSGKISSGIAAIRKNIIDADEIKSKAISSMITPSVMLIVTMVVIAGYSVK 132
               +++  E SG + + +  +       + +K+K   +M  P  +++V ++V A   +K
Sbjct: 132 LYCNLVDSGEQSGSLETLLDRVATYKEKTEALKAKIKKAMNYPIAVVLVAIIVSAILLIK 191

Query: 133 VFPTFESVLP--VSRWPGVTQALYNLGFSLYEGLWIKVLIFVAIFITILVFMSKNITGNF 190
           V P F+ V     +  P  T  L  +G S     W  V++FV   +      +   +  F
Sbjct: 192 VVPQFQDVFANFGAELPAFT--LMVIGLSEALQAWWHVVLFVMFGVAYAFKTAHGKSERF 249

Query: 191 RDG---FLDKLPPFNFVKH-IAATEFLANMSMLLDSRVPFKEGLDIVDHKTTRWL-SSHL 245
           R+G   FL ++P    + +  A   F   ++    + VP  + LD V   T   +  +  
Sbjct: 250 RNGFDRFLLRIPVVGDILYKSAVARFARTLATTFAAGVPLVDALDSVAGATGNVVFRNAT 309

Query: 246 QRMKANMQEGLDYKQALDTNLLDKKMLLTM-AVYSELPNFSDVMQKLAIEANINLHKKIA 304
            ++K+++  G+    ++ T      M + M A+  E     +++ K+A      +   + 
Sbjct: 310 MKVKSDVSSGMQLNFSMRTTGTFPTMAVQMTAIGEESGALDEMLGKVATFYEDEVDNMVD 369

Query: 305 TLAGVMKNISLITLALSVIWIFGAIFSLVDKLSS 338
            L  +M+ + +  L + V  +  A++  + +L S
Sbjct: 370 GLTSLMEPMIMAVLGVLVGGLIIAMYLPIFQLGS 403