Pairwise Alignments

Query, 340 a.a., toxin coregulated pilus biosynthesis protein E from Vibrio cholerae E7946 ATCC 55056

Subject, 409 a.a., type II secretion system protein from Marinobacter adhaerens HP15

 Score = 54.7 bits (130), Expect = 4e-12
 Identities = 67/299 (22%), Positives = 128/299 (42%), Gaps = 20/299 (6%)

Query: 49  IELIKDRMKSNSSLTDALTG---LIPDKEVLMINVAENSGKISSGIAAIRKNIIDADEIK 105
           +E +  R++  +++  A+     +  +  + MI+V EN+G +      + + +    + K
Sbjct: 106 LEDVTTRLEGGTTMATAMQAHPKVFSELFIAMIHVGENTGMLDDAFRRLSEILELERDTK 165

Query: 106 SKAISSMITPSVMLIVTMVVIAGYSVKVFPTFESVLPV--SRWPGVTQALYNLGFSLYEG 163
            +   +M  P  ++I  +  +   +  V P F SV     +  P +TQ L      L   
Sbjct: 166 RRLKQAMRYPMFVIIALLSALMIVNFLVIPKFASVFNKLGADLPFLTQVLVGTSNFLL-A 224

Query: 164 LWIKVLIFVAIFITILVFMSKNITGNFR-DGFLDKLPPFN-FVKHIAATEFLANMSMLLD 221
            W  +L  VA    +L    +   G    D +  KLP     ++ I  + F  N + +L 
Sbjct: 225 YWYVMLFAVAAGGLLLRQWKQTEQGRLTWDRYKLKLPIIGPLLELITLSRFSRNFATMLS 284

Query: 222 SRVPFKEGLDIV-DHKTTRWLSSHLQRMKANMQEGLD-YKQALDTNLLDKKMLLTMAVYS 279
           + +P    L +V D     W+SSH++ M+A ++ G    + A  + +    +L  +AV  
Sbjct: 285 AGMPVTTALTVVADTTDNAWISSHIKDMRAGIERGESLLRTARHSEMFTPLILQMIAVGE 344

Query: 280 ELPNFSDVMQKLA------IEANI-NLHKKIATLAGVMKNISLITLALSV---IWIFGA 328
           E  +  D++  +A      ++  +  L + I  +  V   I ++ LAL V   IW  GA
Sbjct: 345 ETGSVDDMLNNVADFYDEDVDYGLKRLAESIEPILIVAMGILVLILALGVFLPIWDLGA 403