Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 472 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  132 bits (331), Expect = 3e-35
 Identities = 94/325 (28%), Positives = 159/325 (48%), Gaps = 24/325 (7%)

Query: 90  IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATT 149
           I  + + A    ASDIH    +    +++RV+GT+   R+++S        ++  +    
Sbjct: 109 INALLTQAARDEASDIHIEPYESHSVVRYRVDGTL---RDVVSPRKALHGALVSRIKIMA 165

Query: 150 KETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQ 209
           +     ++LPQD  I L +  +    R + +P     G     V+R++      +    +
Sbjct: 166 QLDIAEKRLPQDGRIALRVAGRPIDIRVSTVPT----GHGERVVMRLLDKQAGRL--QLE 219

Query: 210 DIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVED 269
            +G +      +  ++   +G+ +V+G TGSGK+TSL   +  L  + +      +TVED
Sbjct: 220 TLGMDPDVLGKLDHLIRQPHGIVLVTGPTGSGKTTSLYASLARLDASVHN----ILTVED 275

Query: 270 PVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVE 329
           PVEY + G  Q  + A    K    FA A+R+ +R+DPD+IMIGEIRD  T +    A  
Sbjct: 276 PVEYDLPGISQIQVNA----KIDMTFALALRAILRQDPDIIMIGEIRDLETAQIAVQASL 331

Query: 330 SGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDE 389
           +GH  L T+H    VS + RL  +G++   +AS   + G+ +Q+L+  LCP CK     +
Sbjct: 332 TGHLVLATLHTNDAVSAINRLIDMGVEPFLLASS--MLGVLAQRLVRRLCPQCK-----Q 384

Query: 390 RYQRAVFSANENGCEACNHSGFKGR 414
                  +    GC +CN +G+ GR
Sbjct: 385 PDPATPGTWRPVGCPSCNQTGYSGR 409