Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 483 a.a., General secretion pathway protein E from Pseudomonas fluorescens FW300-N2E2

 Score =  136 bits (342), Expect = 2e-36
 Identities = 106/390 (27%), Positives = 184/390 (47%), Gaps = 36/390 (9%)

Query: 90  IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATT 149
           I  + S A    ASD+H    ++   ++ R++G +   +E+L    +    ++  +    
Sbjct: 108 INALLSEAVREQASDVHLETFEQYLSVRMRIDGQL---QEMLRPRRELANLLVSRIKVMA 164

Query: 150 KETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQ 209
           +     +++PQD  + L +       R + +P           V+R++      +  +  
Sbjct: 165 RLDIAEKRVPQDGRMALRLAGHEVDVRVSTLP----SAHGERVVLRLLDKQAGRL--DLH 218

Query: 210 DIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVED 269
            +G  +     +  +L   +G+ +V+G TGSGK+TSL  Y  L   N        +TVED
Sbjct: 219 RLGLPDDTLADLRLLLGKPHGIVLVTGPTGSGKTTSL--YAALSSINDQSRN--ILTVED 274

Query: 270 PVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVE 329
           P+EY + G  Q  +    + K    FA  +R+ +R+DPDV+M+GEIRD+ T E    A  
Sbjct: 275 PIEYHLPGIGQMPV----NPKVDMTFARGLRAILRQDPDVVMVGEIRDRETAEIAVQASL 330

Query: 330 SGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSFV-- 387
           +GH  L+T+H  + V  + RL  +G+ A  +AS   LAGI +Q+L+  LCPSCK  +V  
Sbjct: 331 TGHLVLSTLHTNTAVGAVTRLVDMGVDAYLLASS--LAGIVAQRLLRALCPSCKTPYVAD 388

Query: 388 ---------DERYQRAVFSANENGCEACNHSGFKGRLLLLETLVPTVEDLELV---ASEN 435
                    D      +F A   GCE C   G++GR  + E +       +L+   A+E 
Sbjct: 389 AATCRRLGLDAGAAPRLFKA--QGCEQC-QKGYRGRFGIYELVNVGAALSQLIHQGATEQ 445

Query: 436 WVSLYRKYRERRFIKTGKKGLGEGFSIKDK 465
            ++   +   R   + G++ + EG +  D+
Sbjct: 446 ALAAEARKTSRSLFQDGRQRVLEGLTSVDE 475