Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 504 a.a., general secretory pathway protein E from Pseudomonas stutzeri RCH2

 Score =  154 bits (390), Expect = 5e-42
 Identities = 108/378 (28%), Positives = 188/378 (49%), Gaps = 35/378 (9%)

Query: 61  LVSDANHKLLIANLVTE-QQAKDLSFIEKD------IMKIASSATAYGASDIHFIREDRI 113
           +V    + L +A+L  + Q+ +DL   E D      I  I   A A  ASDIH    ++ 
Sbjct: 92  MVEGLGNDLDLASLADQIQETEDLLEQEDDAPIIRLINAILGEAIAENASDIHIETFEKR 151

Query: 114 CKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAY 173
             I+FRV+G +   RE++  + +    ++  +    K     +++PQD  I L +  +  
Sbjct: 152 LVIRFRVDGIL---REVVQPKRELAALLVSRIKVMAKLDIAEKRIPQDGRISLRVGGREV 208

Query: 174 RFRYAHMPLFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFI 233
             R + +P           V+R++      +   +  +G NE D D + + +   +G+ +
Sbjct: 209 DIRVSTLP----SANGERVVLRLLDKQAGRLTLRH--LGMNEQDRDHLEQAVKKPHGIIL 262

Query: 234 VSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKN 293
           V+G TGSGK+T+L  Y  L   N        +TVEDP+EY + G  Q+ +    + K   
Sbjct: 263 VTGPTGSGKTTTL--YAALTTLNDRTRN--ILTVEDPIEYHLEGIGQTQV----NTKVDM 314

Query: 294 PFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGL 353
            FA  +R+ +R+DPDV+M+GEIRD+ T +    A  +GH  L+T+H  S +  + RL  +
Sbjct: 315 TFARGLRAILRQDPDVVMVGEIRDQETADMAVQASLTGHLVLSTLHTNSAIGAVTRLVDM 374

Query: 354 GMKADKIASPGFLAGITSQKLIPELCPSCKVSFVDERYQRAVFSA---------NENGCE 404
           G++   I+S   L G+ +Q+L+  LC  CK ++V +  + A+            ++ GCE
Sbjct: 375 GVEPFLISSS--LLGVLAQRLVRVLCNDCKRAYVADAAECALLGVSPDNAPTLYHDEGCE 432

Query: 405 ACNHSGFKGRLLLLETLV 422
            C   G++GR  + E ++
Sbjct: 433 QCRGLGYRGRTGIYELVL 450