Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 567 a.a., type IV-A pilus assembly ATPase PilB from Pseudomonas stutzeri RCH2

 Score =  125 bits (314), Expect = 4e-33
 Identities = 108/348 (31%), Positives = 169/348 (48%), Gaps = 34/348 (9%)

Query: 90  IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATT 149
           + K+   A   G+SD+HF   ++  +++ R +G + +        A  +   L  VMA  
Sbjct: 189 VNKMLLDAIRGGSSDLHFEPYEKAFRVRLRTDGILHEVARPPIQLAPRISARL-KVMAGL 247

Query: 150 KETTWNRKLPQDANIILVINE-KAYRFRYAHMP-LFGEGGKNYHAVVRIIYPSNNFVCTN 207
             +   R+ PQD  I + +++ KA  FR   +P L+GE       V+RI+ PS+  +   
Sbjct: 248 DIS--ERRRPQDGRIKMKLSKNKAIDFRVNTLPTLWGE-----KIVMRILDPSSAQM--G 298

Query: 208 YQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTV 267
              +GY E   +     L    G+ +V+G TGSGK+ SL  Y  L   N         T 
Sbjct: 299 IDALGYEEDQKELYMNALKQPQGMILVTGPTGSGKTVSL--YTGLNILNTVDVN--ISTA 354

Query: 268 EDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSA 327
           EDPVE  + G  Q ++    + +    F+ A+R+ +R+DPD+IM+GEIRD  T E    A
Sbjct: 355 EDPVEINLEGINQVNV----NPRQGMDFSQALRAFLRQDPDIIMVGEIRDLETAEIAIKA 410

Query: 328 VESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK--VS 385
            ++GH  ++T+H  S    L RL  +G+ A  IA+   L  I +Q+L  +LC SCK  V 
Sbjct: 411 AQTGHMVMSTLHTNSAAETLTRLRNMGVAAFNIATSVNL--IIAQRLARKLCNSCKKEVE 468

Query: 386 FVDERYQRAVFSANE---------NGCEACNHSGFKGRLLLLETLVPT 424
              E      F A++          GC+ C   G+KGR+ + E +  T
Sbjct: 469 LPREALLGEGFPADKIGAFKIYGPVGCDNCK-GGYKGRVGIYEVVKNT 515