Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 585 a.a., type II secretion system protein E (GspE) from Pseudomonas syringae pv. syringae B728a

 Score =  129 bits (324), Expect = 3e-34
 Identities = 95/295 (32%), Positives = 151/295 (51%), Gaps = 21/295 (7%)

Query: 93  IASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKET 152
           I   A    ASDIH    +   K+++R++G + +     SS + A   V+  V    +  
Sbjct: 208 ILQRAVEQRASDIHIEPFESQLKVRYRIDGVLHEAEAPPSSSSAA---VISRVKIMARLD 264

Query: 153 TWNRKLPQDANIILVINEKAYRFRYAHMPL-FGEGGKNYHAVVRIIYPSNNFVCTNYQDI 211
              R+LPQD  I+L I  K    R + +P  FGE       V+R++      +  ++  +
Sbjct: 265 IAERRLPQDGRIMLRIQGKELDLRVSTVPTSFGES-----VVMRLL--DRQTINFDFPSL 317

Query: 212 GYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPV 271
           G++    D    +L   +G+ +V+G TGSGK+T+L  Y  L   N  + K   +TVEDPV
Sbjct: 318 GFDGERLDEFLDVLERPHGILLVTGPTGSGKTTTL--YTALSRLNTAERK--IITVEDPV 373

Query: 272 EYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESG 331
           EY + G  Q  +           FA A+RS +R+DPDVIMIGE+RD  T      +  +G
Sbjct: 374 EYQLEGINQIQV----KPSIGLDFAGALRSIVRQDPDVIMIGEMRDLETCRIAIQSSLTG 429

Query: 332 HYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSF 386
           H  L+T+H  S  + + RL  +G+++  IAS   + GI +Q+L+  L P+ + +F
Sbjct: 430 HLVLSTLHTNSAAASITRLLDMGVESYLIAST--VNGILAQRLVRRLDPATREAF 482