Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 564 a.a., type II secretion system protein E:General secretory system II, protein E, N-terminal from Pseudomonas syringae pv. syringae B728a

 Score =  133 bits (335), Expect = 1e-35
 Identities = 119/399 (29%), Positives = 191/399 (47%), Gaps = 36/399 (9%)

Query: 74  LVTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSS 133
           L T+  A D   + + + K+   A   G+SD+HF   ++I +++ R +G + +       
Sbjct: 171 LATQNDADDAPVV-RFVNKMLMDAIRLGSSDLHFEPYEKIFRVRLRTDGILHEVARPPIH 229

Query: 134 EADALMFVLYNVMATTKETTWNRKLPQDANIILVINE-KAYRFRYAHMP-LFGEGGKNYH 191
            A+ +   L  VMA+   +   R+ PQD  + L +++ KA  FR   +P L+GE      
Sbjct: 230 LANRIAARL-KVMASLDIS--ERRKPQDGRVKLRVSKTKAIDFRMNTLPTLWGE-----K 281

Query: 192 AVVRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIE 251
            V+RI+ P++  +      +GY           L    G+ +V+G TGSGK+ SL  Y  
Sbjct: 282 IVMRILDPTSAQM--GIDALGYEPDQKALYLEALKLPQGMILVTGPTGSGKTVSL--YTG 337

Query: 252 LLFFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIM 311
           L   N         T EDPVE  + G  Q ++    + +    F+ A+R+ +R+DPDVIM
Sbjct: 338 LNILNTVDIN--ISTAEDPVEINLEGINQVNV----NPRQGLDFSQALRAFLRQDPDVIM 391

Query: 312 IGEIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITS 371
           +GEIRD  T E    A ++GH  L+T+H  S    L RL  +G+ A  IA+   L  I +
Sbjct: 392 VGEIRDLETAEIAIKASQTGHMVLSTLHTNSAAETLTRLHHMGVAAFNIATAINL--IIA 449

Query: 372 QKLIPELCPSCK-------VSFVDERYQRAVFSA----NENGCEACNHSGFKGRLLLLET 420
           Q+L  +LC  CK        + + E +  A           GCE CN  G++GR+ + E 
Sbjct: 450 QRLARKLCSHCKKELDIPRETLIQEGFPEAKIGTFKVYGPVGCEHCN-GGYRGRVGIYEV 508

Query: 421 LVPTVEDLELVASE-NWVSLYRKYRERRFIKTGKKGLGE 458
           +  T E   ++  E N + + R+ R+  F      GL +
Sbjct: 509 VKKTPELERIIMEEGNSLEISRQMRKDGFNDLRTSGLSK 547