Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 666 a.a., ATPase from Synechococcus elongatus PCC 7942

 Score =  126 bits (316), Expect = 3e-33
 Identities = 106/362 (29%), Positives = 164/362 (45%), Gaps = 56/362 (15%)

Query: 92  KIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKE 151
           KI   A   GASDIH   ++   +++ R +G +      L  +    +     +MA    
Sbjct: 232 KILLKALTEGASDIHVEPQEDGLRVRLRRDGVLHQEFGTLPKKIQPALISRLKIMANLDI 291

Query: 152 TTWNRKLPQDANIILVINEKAYRFRYAHMPL-FGEGGKNYHAVVRIIYPSNNFVCTNYQD 210
               R++PQD  I  +   +   FR   +P  FGE        +R++  S          
Sbjct: 292 A--ERRVPQDGRIRRMFQGRKIDFRVNSLPSHFGE-----KICMRLLDNSAT-------Q 337

Query: 211 IGYNEADTDAIARIL-----NTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFV 265
           +G ++  TD  A  L     +  YGL +V+G TGSGKSTSL      L   +        
Sbjct: 338 LGLDQLITDEEALALVRDMGSRPYGLILVTGPTGSGKSTSLYS----LLAERNDPAININ 393

Query: 266 TVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALS 325
           T EDP+EY + G  Q  ++ +   K  N FA  +R+ MR+DPDVI++GE RD  T     
Sbjct: 394 TAEDPIEYTLPGLTQVQVLRE---KGMN-FASILRAFMRQDPDVILVGETRDLETARTAI 449

Query: 326 SAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVS 385
            A  +GH  LTT+HA    S + RLS +G++   ++  G L G+ SQ+L+  +CP C+V 
Sbjct: 450 EAALTGHLVLTTLHANDAPSAIARLSEMGVEPYLVS--GSLIGVVSQRLMRRVCPDCRVP 507

Query: 386 F-----------------VDERYQRA-------VFSANENG--CEACNHSGFKGRLLLLE 419
           +                 +D  + +A       +  A   G  C  C  +G+KGR+ + E
Sbjct: 508 YTPNPEELGRYGLSASQELDVTFYKAKTLTSDSLAQARSQGQVCRTCRGTGYKGRVGVYE 567

Query: 420 TL 421
            +
Sbjct: 568 VM 569