Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., MSHA biogenesis protein MshE (RefSeq) from Shewanella amazonensis SB2B

 Score =  127 bits (320), Expect = 8e-34
 Identities = 95/350 (27%), Positives = 170/350 (48%), Gaps = 34/350 (9%)

Query: 86  IEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNV 145
           + K +  I   A    ASDIH    D+  +I+ RV+G +   +E + +E      ++  +
Sbjct: 183 VVKLLQSIFEDAVQMRASDIHIEPGDKSLRIRQRVDGHL---QETILNEVTIAAALVLRL 239

Query: 146 MATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLF-GEGGKNYHAVVRIIYPSNNFV 204
                     ++LPQD    + +       R + MP++ GE       V+R++  S   +
Sbjct: 240 KLMAGLDISEKRLPQDGRFHMEVKGHKIDVRISTMPIYHGES-----VVMRLLDQSAGLL 294

Query: 205 CTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCF 264
             N  + G  +A    + + +   +G+ +V+G TGSGK+T+L   +  L     K     
Sbjct: 295 TLN--ETGMPDAILQRVRKQIKRPHGMLLVTGPTGSGKTTTLYGILSELNTADRK----I 348

Query: 265 VTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEAL 324
           +TVEDPVEY +    Q  +    + K    F++ +R+ +R+DPD+IM+GE+RD  TVE  
Sbjct: 349 ITVEDPVEYQLPRINQVQV----NHKIGLNFSNVLRTTLRQDPDIIMVGEMRDHETVEIG 404

Query: 325 SSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKV 384
                +GH+ L+T+H    V+   RL  +G  +  +AS   L  I +Q+L+  +C +C V
Sbjct: 405 LRGALTGHFVLSTLHTNDAVTSALRLLDMGAASYLVASA--LRVIIAQRLVRRVCQNCAV 462

Query: 385 SF----VDERYQRAVFSANE---------NGCEACNHSGFKGRLLLLETL 421
            +     D+ +  +V    +          GC++C+ +G++GR+ + E L
Sbjct: 463 DYQLTSQDKAWLTSVSKGVDFSQARFRMGTGCQSCSGTGYRGRIGIFELL 512