Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 688 a.a., type II secretion system protein E (NCBI) from Rhodospirillum rubrum S1H

 Score =  134 bits (337), Expect = 1e-35
 Identities = 100/348 (28%), Positives = 172/348 (49%), Gaps = 42/348 (12%)

Query: 102 ASDIHFIREDRICKIKFRVNGTM----IDYREILSSEADALMFVLYNVMATTKETTWNRK 157
           ASD+HF  +    +++ R++GT+    I +++   + A  L  +    +A       +R 
Sbjct: 319 ASDLHFEPQGAFLRVRLRIDGTLSQTLIFHKQYWPAVAQRLKILAGMNIA-------DRL 371

Query: 158 LPQDANIILVINEKAYRFRYAHMP-LFGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEA 216
            PQD    + I  +   FR + +P + GE     + V+R++    +      + +     
Sbjct: 372 GPQDGRFSMAIAHRKIDFRASVIPTVHGE-----NMVLRVL--DRSATPLKLEQLALAHG 424

Query: 217 DTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLIS 276
             D +  ++    GL +V+G TGSGK+T+L   ++ +   +       VT+EDPVEY + 
Sbjct: 425 TLDPLELLVRRPEGLLLVTGPTGSGKTTTLYALMDHISGPEIT----IVTLEDPVEYDLP 480

Query: 277 GAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLT 336
             +Q+ +     +  +  FAD +R+ +R+DPDV+++GEIRD  T      A  +GH    
Sbjct: 481 LLRQTQV----REGARLGFADGIRALLRQDPDVMLVGEIRDADTAAMALRAAMTGHQVYA 536

Query: 337 TIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCKVSF---------- 386
           T+HA    S L RL  LG++   +A  G L G+ +Q+L+  LCP C+ S+          
Sbjct: 537 TLHANDAPSALPRLMDLGLRPGLLA--GSLIGVLAQRLVRRLCPHCRQSYRASPVECKIL 594

Query: 387 -VDERYQRAVFSANENGCEACNHSGFKGRLLLLETLVPTVEDLELVAS 433
            +D      +F A   GCEAC  +G+ GR+ + E L  + E  +L+AS
Sbjct: 595 GLDATDPPEIFRA--RGCEACGQTGYHGRVPISELLSISPEIDDLIAS 640