Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 497 a.a., general secretion pathway protein GspE from Klebsiella michiganensis M5al

 Score =  139 bits (351), Expect = 2e-37
 Identities = 114/416 (27%), Positives = 199/416 (47%), Gaps = 40/416 (9%)

Query: 45  KFRVNLLKKDKVYKYFLVSDANHKLLIANLVTE-QQAKDLSFIEKD------IMKIASSA 97
           K  V   ++D      +++D  ++L +  L  E     DL   E D      I  + + A
Sbjct: 66  KLLVLSYQRDSAEARRMMADIGNELDLYTLAEELPDTDDLLDSEDDAPIIRLINAMLTEA 125

Query: 98  TAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATTKETTWNRK 157
               ASDIH    +R  +I+FRV+G +   REIL  +      ++  +          ++
Sbjct: 126 IKEKASDIHIETYERHLQIRFRVDGVL---REILRPQRRLAALLISRIKVMASLDIAEKR 182

Query: 158 LPQDANIILVINEKAYRFRYAHMPL-FGEGGKNYHAVVRIIYPSNNFVCTNYQDIGYNEA 216
           +PQD  + L I  +A   R + +P  +GE       V+R++    N V  +   +G   A
Sbjct: 183 IPQDGRMALRIGGRAVDVRVSTLPSSYGE-----RVVLRLL--DKNSVNLDLLTLGMTPA 235

Query: 217 DTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKGCFVTVEDPVEYLIS 276
               +  ++   +G+ +V+G TGSGKST+L   +  L   +       +T+EDP+EY + 
Sbjct: 236 LLRQVDGLIARPHGIVLVTGPTGSGKSTTLYAALSRLDARERN----IMTIEDPIEYELE 291

Query: 277 GAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVEALSSAVESGHYCLT 336
           G  Q+ + A    K    FA  +R+ +R+DPDV+++GEIRD  T +    A  +GH  L+
Sbjct: 292 GIGQTQVNA----KVDMTFARGLRAILRQDPDVVLVGEIRDGETAQIAVQASLTGHLVLS 347

Query: 337 TIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSCK---VSFVDERYQR 393
           T+H  S +  + RL  +G++   +++   L  + SQ+L+  LCP C+    +  D  +Q 
Sbjct: 348 TLHTNSALGAISRLQDMGVEPFLLSTS--LLAVMSQRLVRRLCPHCRQQEPANADTAHQM 405

Query: 394 AVFSA----NENGCEACNHSGFKGRLLLLETLVPTVED---LELVASENWVSLYRK 442
            +          GC  C  +G++GR  + E L+  V+D   + +   EN V+L ++
Sbjct: 406 EIAPGTALWQPRGCAECGFTGYRGRTGIHELLL--VDDRVRMAIHRGENEVTLIQQ 459