Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 461 a.a., type II secretion system protein GspE from Klebsiella michiganensis M5al

 Score =  134 bits (337), Expect = 7e-36
 Identities = 103/345 (29%), Positives = 168/345 (48%), Gaps = 32/345 (9%)

Query: 86  IEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREI---LSSEADALMFVL 142
           + + +  +   A    ASDIH    D   +I+ RV+G +     +   L++   A + VL
Sbjct: 81  VVEQVNNLLEQALRQRASDIHIEPGDDRLRIRLRVDGVLHSLAPLAAELAAPITARLKVL 140

Query: 143 YNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIYPSNN 202
            N+           ++PQD    L ++E+   FR A +P    GG+    V+R+++    
Sbjct: 141 GNLDIA------EHRVPQDGQFTLTLSERPISFRIATLPC--RGGEKI--VLRLLHQVEQ 190

Query: 203 FVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKGKG 262
            +  + + +G +     A    LN   GL +V+G TGSGK+ +L  Y  L   N+ +   
Sbjct: 191 AL--DLEALGLSSQQLAAFRSALNQPQGLMLVTGPTGSGKTVTL--YSALQARNRDEVNI 246

Query: 263 CFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPTVE 322
           C  +VEDP+E  I G  Q+ I    + +    F   +R+ +R+DPD++M+GEIRD  T E
Sbjct: 247 C--SVEDPLEIPIVGMNQTQI----NPRAGLTFHSVLRALLRQDPDIVMVGEIRDAETAE 300

Query: 323 ALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCPSC 382
               A ++GH  L+T+H  S    L RL  +G+    I+S   L+ + +Q+L+ +LCP C
Sbjct: 301 IAIKAAQTGHLVLSTLHTNSTSETLVRLQQMGVARWMISSA--LSLVVAQRLVRKLCPHC 358

Query: 383 K------VSFVDERYQRAVFSANENGCEACNHSGFKGRLLLLETL 421
           +             + RA+      GC+ C H G+ GRL L E L
Sbjct: 359 RRETGSSADVPHSLWPRALPRWQAPGCQHCYH-GYYGRLALFELL 402