Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 573 a.a., general secretion pathway protein E, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  141 bits (356), Expect = 5e-38
 Identities = 102/372 (27%), Positives = 180/372 (48%), Gaps = 36/372 (9%)

Query: 82  DLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFV 141
           DL+ + + +  I + A   GASD+H   E    +++FR++G + +      + A A++  
Sbjct: 182 DLAPVVRLVNSILAQAVREGASDVHISPEKDSRQVRFRIDGKLREAPAPPKNVAPAMVSR 241

Query: 142 LYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMP-LFGEGGKNYHAVVRIIYPS 200
           L  +       T   ++PQD    + ++ +    R + +P ++GE     + V+R++  S
Sbjct: 242 LKILGNMDIAVT---RVPQDGRFTMNLDNREINVRVSSIPTIYGE-----NMVLRLLDMS 293

Query: 201 NNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKYKG 260
                 +   +G  + D   I R+++  YG+ + +G TGSGKSTSL   ++ +   +   
Sbjct: 294 GRDYTLD--QLGMEQTDHTVIKRVIHKPYGMILSTGPTGSGKSTSLYAILKSINTPEIN- 350

Query: 261 KGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDKPT 320
               +T+EDPVEY I G +Q  +    + K    FA  +RS +R+DPDV+M+GEIRD  T
Sbjct: 351 ---IITLEDPVEYRIGGIRQVQL----NRKAGMTFASGLRSILRQDPDVVMVGEIRDAET 403

Query: 321 VEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPELCP 380
                 A  +GH  L+T+H       + RL  +G++   ++S   +    +Q+L+  +CP
Sbjct: 404 ASIAVQAALTGHLVLSTLHTNDAAGAVTRLIDMGIEPFLVSS--VMLASFAQRLVRRVCP 461

Query: 381 SCKVSFVDERYQRAVFSANE-------------NGCEACNHSGFKGRLLLLETL--VPTV 425
           +C   +       A F  +               GC  C H+G++GR  L E L  VP +
Sbjct: 462 NCAEPYDPPHAALAAFGIDPAEGHDGRSRFLKGRGCFHCAHTGYRGRTGLFEILPMVPEI 521

Query: 426 EDLELVASENWV 437
           ++L +  S   V
Sbjct: 522 QELVVRRSSTQV 533