Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., type IV-A pilus assembly ATPase PilB from Ralstonia sp. UNC404CL21Col

 Score =  146 bits (368), Expect = 2e-39
 Identities = 105/369 (28%), Positives = 176/369 (47%), Gaps = 47/369 (12%)

Query: 90  IMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADALMFVLYNVMATT 149
           + K+ + A   GASD+HF   +   +++FR++G +    ++     D    +   +   +
Sbjct: 182 LQKLFTEALLRGASDLHFEPFETFYRVRFRIDGILA---QVAQPPLDIRDKIATRIKVLS 238

Query: 150 KETTWNRKLPQDANIILVIN--------------EKAYRFRYAHMP-LFGEGGKNYHAVV 194
           +     +++PQD  + L+I               E+A  FR + +P LFGE       V+
Sbjct: 239 RLDISEKRVPQDGRMKLLITVPKDRKDKDNKETIERAIDFRVSTLPTLFGE-----KIVI 293

Query: 195 RIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLF 254
           RI+  S   +  +   +GY       +  ++   YG+ +V+G TGSGK+ SL  ++  L 
Sbjct: 294 RILESSTERL--DIDQLGYEPEQKQLLLDVIKRPYGMVLVTGPTGSGKTVSLYTFLNRL- 350

Query: 255 FNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGE 314
               +G     T EDP E  + G  Q ++    +DK    FA A++S +R+DPD+IM+GE
Sbjct: 351 ---NQGDINISTAEDPAEIQLPGINQVNV----NDKAGLTFAAALKSFLRQDPDIIMVGE 403

Query: 315 IRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKL 374
           IRD  T +    A ++GH   +T+H     + L RL  +G+    IAS   L  IT+Q+L
Sbjct: 404 IRDLETADISIKAAQTGHLVFSTLHTNDAPTTLTRLMNMGVAPFNIASSVLL--ITAQRL 461

Query: 375 IPELCPSC-------KVSFVDERYQRAVFSANEN-----GCEACNHSGFKGRLLLLETLV 422
              LC  C       K + +D  +  A    +       GCE CN SG+KGR+ + + + 
Sbjct: 462 ARRLCKECKKPGPLPKETLLDAGFTEADLDGSWQPYHPVGCEVCNGSGYKGRVGIYQVMP 521

Query: 423 PTVEDLELV 431
            T    E++
Sbjct: 522 ITEAIQEII 530