Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., general secretion pathway protein E from Burkholderia phytofirmans PsJN

 Score =  145 bits (366), Expect = 3e-39
 Identities = 103/348 (29%), Positives = 176/348 (50%), Gaps = 30/348 (8%)

Query: 79  QAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSEADAL 138
           +++D + I + I  + + A    ASDIH    +    ++FRV+GT+   R+++  +    
Sbjct: 119 ESEDDAPIIRMINALLTQAAREQASDIHIEPFETSSVVRFRVDGTL---RDVVRPKKALH 175

Query: 139 MFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLFGEGGKNYHAVVRIIY 198
             ++  +    +     ++LPQD  I L +  +    R + +P     G    AV+R++ 
Sbjct: 176 GALISRIKIMAQLDIAEKRLPQDGRITLRVGGRPVDVRVSTLPT----GHGERAVLRLLE 231

Query: 199 PSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELLFFNKY 258
              + +  N + +G          +++   +G+ +V+G TGSGK+T+L   +  L     
Sbjct: 232 KDASRL--NLEALGMASDTLGKFDKLIGRPHGIVLVTGPTGSGKTTTLYAAMSRL----E 285

Query: 259 KGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIGEIRDK 318
                 +TVEDP+EY +SG  Q+ +    +++    FA A+RS +R+DPDVIMIGEIRD 
Sbjct: 286 TATTNIMTVEDPIEYDLSGIGQTQV----NERIGMTFARALRSILRQDPDVIMIGEIRDL 341

Query: 319 PTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQKLIPEL 378
            T +    A  +GH  L T+H     S + RL+ +G++   +AS   L G+ +Q+L+  L
Sbjct: 342 ETAQIAVQASLTGHLVLATLHTNDAASAVTRLTDMGVEPYLLASS--LLGVLAQRLVRRL 399

Query: 379 CPSCKVSFVDE----RYQRAVFSANENGCEACNHSGFKGRLLLLETLV 422
           CP C+   V+E    RY          GC+ C HSG+ GR  + E L+
Sbjct: 400 CPICREERVEEDGSVRYHPV-------GCDRCGHSGYAGRRGVYELLL 440