Pairwise Alignments

Query, 503 a.a., toxin coregulated pilus biosynthesis protein T from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., type II secretion system protein E (RefSeq) from Shewanella sp. ANA-3

 Score =  130 bits (326), Expect = 2e-34
 Identities = 96/360 (26%), Positives = 173/360 (48%), Gaps = 33/360 (9%)

Query: 75  VTEQQAKDLSFIEKDIMKIASSATAYGASDIHFIREDRICKIKFRVNGTMIDYREILSSE 134
           +T   + + + + K +  I   A    ASDIH    ++  +I+ R++G +    E + +E
Sbjct: 172 LTSSDSDNETTVVKLLQSIFEDAVQMRASDIHIEPGEKALRIRQRIDGQL---HETILNE 228

Query: 135 ADALMFVLYNVMATTKETTWNRKLPQDANIILVINEKAYRFRYAHMPLF-GEGGKNYHAV 193
            +    ++  +          ++LPQD    + I       R + MP++ GE       V
Sbjct: 229 VNIAAALVLRLKLMAGLDISEKRLPQDGRFHMEIKGHKIDVRMSTMPIYHGES-----VV 283

Query: 194 VRIIYPSNNFVCTNYQDIGYNEADTDAIARILNTSYGLFIVSGTTGSGKSTSLKKYIELL 253
           +R++  S   +  N  + G        I + +   +G+ +V+G TGSGK+T+L   +  L
Sbjct: 284 MRLLDQSAGLLTLN--ETGMPPHILARIRKQIKRPHGMLLVTGPTGSGKTTTLYGILSEL 341

Query: 254 FFNKYKGKGCFVTVEDPVEYLISGAQQSSIVADNDDKTKNPFADAVRSAMRRDPDVIMIG 313
                K     +TVEDPVEY +    Q  +    + K    F++ +R+ +R+DPD+IM+G
Sbjct: 342 NTADRK----IITVEDPVEYQLPRINQVQV----NHKIGLDFSNVLRTTLRQDPDIIMVG 393

Query: 314 EIRDKPTVEALSSAVESGHYCLTTIHAGSVVSVLQRLSGLGMKADKIASPGFLAGITSQK 373
           E+RD+ TVE       +GH+ L+T+H    V+   RL  +G  +  +AS   L  I +Q+
Sbjct: 394 EMRDQETVEIGLRGALTGHFVLSTLHTNDAVTSALRLLDMGAASYLVASA--LRVIIAQR 451

Query: 374 LIPELCPSCKVSFVDERYQRAVFSANE------------NGCEACNHSGFKGRLLLLETL 421
           L+  +C +C V +     ++A  ++               GC++CN SG++GR+ + E L
Sbjct: 452 LVRRVCHNCGVEYQPTAQEKAWLNSVSRQDFSSAKFRIGTGCQSCNGSGYRGRIGIFEIL 511