Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  156 bits (395), Expect = 2e-42
 Identities = 114/357 (31%), Positives = 187/357 (52%), Gaps = 6/357 (1%)

Query: 265 QLIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWILALSD---GQIKERRPIKFH--NE 319
           Q+I A   G    +L+GL   L    S V  ++E + A+++   G+    R +  H  +E
Sbjct: 189 QVIKASVVGLVITLLMGLLLTLIVR-SIVGPLQETVNAMANIASGESDLTRTLDTHGQDE 247

Query: 320 LDTIAQSLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATA 379
           +  +A+       +L  VV     + + L    +++          SQQ+   +E VATA
Sbjct: 248 VTQLARHFNAFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQERSQQQSQQMELVATA 307

Query: 380 TTQLSCTSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQL 439
             +++    DV + A+ A      A+    +    ID S +Q + ++ +I ++ ++I  L
Sbjct: 308 INEVTYGVQDVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRLSQTIDQAVEVIRTL 367

Query: 440 REFSDNISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQST 499
              S  I SV +VI +I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR LA +TQ+ST
Sbjct: 368 ASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRLLAQRTQKST 427

Query: 500 IDIQGIILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVS 559
            +IQ +I +LQ  S+ A +V+  +      T        AS N I   +  ++++N+ ++
Sbjct: 428 AEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIGQALRNLNSLNASIA 487

Query: 560 TAANEQKIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFKI 616
           +A  +Q  V ED+ + +     L      A E++ QA+  +  L+  LN  L+ F++
Sbjct: 488 SATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSEQLNGLLTQFRV 544