Pairwise Alignments

Query, 620 a.a., toxin coregulated pilus biosynthesis protein I from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein from Pseudomonas fluorescens FW300-N2E2

 Score =  152 bits (385), Expect = 3e-41
 Identities = 102/350 (29%), Positives = 177/350 (50%), Gaps = 2/350 (0%)

Query: 266 LIIAGFSGFSCVMLIGLYWVLSKELSGVRQIREWILALSDGQIKERRPIKFHNELDTIAQ 325
           +++ G  G   V+++    VLS     + ++ +  +A   G +K R  ++  +EL  +  
Sbjct: 196 ILLVGLLGCILVLVVLPLVVLSPMRRLLHRVEQ--IAEGGGDLKGRLEVRSADELGQLGS 253

Query: 326 SLENLQFRLLDVVRNSHRTMNDLSIKQTDITYSIEGNTNNSQQELGLIEQVATATTQLSC 385
           +      +L  ++    R   ++      +      N      E   ++QV+TA TQ+S 
Sbjct: 254 AFNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLISSEHAALDQVSTAATQMSA 313

Query: 386 TSFDVMQQAQSAELNAETAQKLIAESHDIIDSSSKQTEMVTLSIHESQQIINQLREFSDN 445
              +V   A +A   A+ A     +  +++ S+ +    +   +  +   I  L + + +
Sbjct: 314 AVHEVAHNAANASGAAQQASSQSRDGAEVVSSTIESIRQLAQEVESASGTIEALAQETSS 373

Query: 446 ISSVTDVINNISDQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAVKTQQSTIDIQGI 505
           I +V +VI  I++QTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA +TQ ST DIQ  
Sbjct: 374 IGAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRALAARTQDSTKDIQVR 433

Query: 506 ILKLQEQSQLADQVMTRNVSLIHETQVANRALIASFNLISDKVLEISNINSIVSTAANEQ 565
           I +LQ     A Q M    +   ++      +    +     + +I+++ + +++A  EQ
Sbjct: 434 IERLQSGVAKAVQAMHVGSTKARDSVERAAGVDQVLSGTGGSIQQINDMAAQIASACEEQ 493

Query: 566 KIVTEDVAKQMEDIRYLVQENLSAMERTKQANQNISDLTTNLNDALSFFK 615
             VTE++A+ + DIR L  E  +   ++  A+Q +S L+ NL +    F+
Sbjct: 494 SSVTEEIARNISDIRDLSNEAAANSAQSMHASQQLSSLSRNLAELTGRFR 543